RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 CCNHP51946 323 aaPredicted RBP26.92■■□□□ 1.9
NPHP3-202ENST00000383282 CLDN2P57739 230 aa26.92■■□□□ 1.9
NPHP3-202ENST00000383282 ARF5P84085 180 aa26.92■■□□□ 1.9
NPHP3-202ENST00000383282 INSM1Q01101 510 aaPredicted RBP26.92■■□□□ 1.9
NPHP3-202ENST00000383282 TMEM259Q4ZIN3 620 aa26.92■■□□□ 1.9
NPHP3-202ENST00000383282 GCNT7Q6ZNI0 430 aa26.92■■□□□ 1.9
NPHP3-202ENST00000383282 PTAR1Q7Z6K3 402 aaPredicted RBP26.92■■□□□ 1.9
NPHP3-202ENST00000383282 ZSCAN30Q86W11 494 aa26.92■■□□□ 1.9
NPHP3-202ENST00000383282 EMC1Q8N766 993 aa26.92■■□□□ 1.9
NPHP3-202ENST00000383282 LMBRD1Q9NUN5 540 aa26.92■■□□□ 1.9
NPHP3-202ENST00000383282 UCKL1Q9NWZ5 548 aa26.92■■□□□ 1.9
NPHP3-202ENST00000383282 FCF1Q9Y324 198 aaKnown RBP26.92■■□□□ 1.9
NPHP3-202ENST00000383282 HS3ST3A1Q9Y663 406 aa26.92■■□□□ 1.9
NPHP3-202ENST00000383282 ITPR1Q14643 2758 aa26.92■■□□□ 1.9
NPHP3-202ENST00000383282 CXorf51AA0A1B0GTR3 108 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 NEMP2A6NFY4 417 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 RRP8O43159 456 aaKnown RBP26.91■■□□□ 1.9
NPHP3-202ENST00000383282 PIAS2O75928 621 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 TPM2P07951 284 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 SDC4P31431 198 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 GEMIN4P57678 1058 aaKnown RBP26.91■■□□□ 1.9
NPHP3-202ENST00000383282 CDO1Q16878 200 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 Q6ZSR6 202 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 BAP1Q92560 729 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 SLC17A9Q9BYT1 436 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 RETREG1Q9H6L5 497 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 ZDHHC6Q9H6R6 413 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 EVA1BQ9NVM1 165 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 TAB2Q9NYJ8 693 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 OR12D3Q9UGF7 316 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 FADS3Q9Y5Q0 445 aa26.91■■□□□ 1.9
NPHP3-202ENST00000383282 GFPT2O94808 682 aa26.9■■□□□ 1.9
NPHP3-202ENST00000383282 EIF2S3P41091 472 aaKnown RBP26.9■■□□□ 1.9
NPHP3-202ENST00000383282 MAPKAPK2P49137 400 aa26.9■■□□□ 1.9
NPHP3-202ENST00000383282 CDR2Q01850 454 aa26.9■■□□□ 1.9
NPHP3-202ENST00000383282 ARTNQ5T4W7 220 aa26.9■■□□□ 1.9
NPHP3-202ENST00000383282 RWDD4Q6NW29 188 aaKnown RBP26.9■■□□□ 1.9
NPHP3-202ENST00000383282 KYAT3Q6YP21 454 aaKnown RBP26.9■■□□□ 1.9
NPHP3-202ENST00000383282 SLC22A18ASQ8N1D0 253 aa26.9■■□□□ 1.9
NPHP3-202ENST00000383282 RYBPQ8N488 228 aaPredicted RBP26.9■■□□□ 1.9
NPHP3-202ENST00000383282 TM6SF2Q9BZW4 377 aa26.9■■□□□ 1.9
NPHP3-202ENST00000383282 NLGN3Q9NZ94 848 aa26.9■■□□□ 1.9
NPHP3-202ENST00000383282 HPCAL4Q9UM19 191 aa26.9■■□□□ 1.9
NPHP3-202ENST00000383282 AP1G1O43747 822 aa26.89■■□□□ 1.9
NPHP3-202ENST00000383282 PAK4O96013 591 aaPredicted RBP26.89■■□□□ 1.9
NPHP3-202ENST00000383282 MT-CO3P00414 261 aa26.89■■□□□ 1.9
NPHP3-202ENST00000383282 ADRA1BP35368 520 aa26.89■■□□□ 1.9
NPHP3-202ENST00000383282 HNRNPKP61978 463 aaKnown RBP eCLIP26.89■■□□□ 1.9
NPHP3-202ENST00000383282 NRG1Q02297 640 aaPredicted RBP26.89■■□□□ 1.9
NPHP3-202ENST00000383282 TMC6Q7Z403 805 aa26.89■■□□□ 1.9
NPHP3-202ENST00000383282 PLPP6Q8IY26 295 aa26.89■■□□□ 1.9
NPHP3-202ENST00000383282 DCBLD1Q8N8Z6 715 aa26.89■■□□□ 1.9
NPHP3-202ENST00000383282 RXFP2Q8WXD0 754 aa26.89■■□□□ 1.9
NPHP3-202ENST00000383282 ISG20Q96AZ6 181 aaKnown RBP26.89■■□□□ 1.9
NPHP3-202ENST00000383282 DUSP23Q9BVJ7 150 aa26.89■■□□□ 1.9
NPHP3-202ENST00000383282 DNAJC28Q9NX36 388 aa26.89■■□□□ 1.9
NPHP3-202ENST00000383282 NOCTQ9UK39 431 aaKnown RBP26.89■■□□□ 1.9
NPHP3-202ENST00000383282 DOCK9Q9BZ29 2069 aa26.89■■□□□ 1.89
NPHP3-202ENST00000383282 LOC400499M0QZD8 3231 aa26.89■■□□□ 1.89
NPHP3-202ENST00000383282 ARID1BQ8NFD5 2236 aaPredicted RBP26.89■■□□□ 1.89
NPHP3-202ENST00000383282 BAHCC1Q9P281 2608 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 TLX3O43711 291 aaPredicted RBP26.88■■□□□ 1.89
NPHP3-202ENST00000383282 CYP1A1P04798 512 aaPredicted RBP26.88■■□□□ 1.89
NPHP3-202ENST00000383282 RHOQP17081 205 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 MMP8P22894 467 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 DUSP3P51452 185 aaPredicted RBP26.88■■□□□ 1.89
NPHP3-202ENST00000383282 SGCGQ13326 291 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 POLD3Q15054 466 aaPredicted RBP26.88■■□□□ 1.89
NPHP3-202ENST00000383282 C15orf59Q2T9L4 293 aaPredicted RBP26.88■■□□□ 1.89
NPHP3-202ENST00000383282 KDM7AQ6ZMT4 941 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 PARS2Q7L3T8 475 aaKnown RBP26.88■■□□□ 1.89
NPHP3-202ENST00000383282 STRADAQ7RTN6 431 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 SLC20A1Q8WUM9 679 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 RAB7BQ96AH8 199 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 CRELD1Q96HD1 420 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 BMFQ96LC9 184 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 C11orf70Q9BRQ4 267 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 OSBPL2Q9H1P3 480 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 GANQ9H2C0 597 aa26.88■■□□□ 1.89
NPHP3-202ENST00000383282 IPO11Q9UI26 975 aaKnown RBP26.88■■□□□ 1.89
NPHP3-202ENST00000383282 H3BM21 787 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 NEMP1O14524 444 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 CKMT1AP12532 417 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 ACVRL1P37023 503 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 RABIFP47224 123 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 POLR2FP61218 127 aaKnown RBP26.87■■□□□ 1.89
NPHP3-202ENST00000383282 FMO1Q01740 532 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 CCDC14Q49A88 953 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 FKBP15Q5T1M5 1219 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 MANEALQ5VSG8 457 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 TRIM72Q6ZMU5 477 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 SNIP1Q8TAD8 396 aaKnown RBP26.87■■□□□ 1.89
NPHP3-202ENST00000383282 FGF11Q92914 225 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 TBC1D31Q96DN5 1066 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 MAGEH1Q9H213 219 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 VPS16Q9H269 839 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 USP29Q9HBJ7 922 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 TMEM248Q9NWD8 314 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 DNAI1Q9UI46 699 aa26.87■■□□□ 1.89
NPHP3-202ENST00000383282 DAAM1Q9Y4D1 1078 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms