RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 RARAP10276 462 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 SRCP12931 536 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 GOT1P17174 413 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 CD6P30203 668 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 HTR7P34969 479 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 CYLC1P35663 651 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 PSMD8P48556 350 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 DNA2P51530 1060 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 CREB5Q02930 508 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 COL9A2Q14055 689 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 KRT81Q14533 505 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 MESDQ14696 234 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 AGERQ15109 404 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 SPA17Q15506 151 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 TTC31Q49AM3 519 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 PMS2CLQ68D20 193 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 TXNRD3NBQ6F5E7 133 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 UNQ6494/PRO21346Q6UXR6 183 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 LEKR1Q6ZMV7 388 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 RFX8Q6ZV50 586 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 Q6ZVU0 165 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 CYP4V2Q6ZWL3 525 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 CPNE8Q86YQ8 564 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 PSTKQ8IV42 348 aaKnown RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 CCDC170Q8IYT3 715 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 SLC35G2Q8TBE7 412 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 FRS2Q8WU20 508 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 PTPRN2Q92932 1015 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 EIF3CQ99613 913 aaKnown RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 ACE2Q9BYF1 805 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 RSPH9Q9H1X1 276 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 MAGEH1Q9H213 219 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 VPS45Q9NRW7 570 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 RXFP3Q9NSD7 469 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 USP36Q9P275 1121 aaKnown RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 HPCAL4Q9UM19 191 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 WASF3Q9UPY6 502 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 HS3ST2Q9Y278 367 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 NCKAP1Q9Y2A7 1128 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 GCN1Q92616 2671 aaKnown RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 WASH4PA8MWX3 477 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 GOLGA6L6A8MZA4 724 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 RASA4BC9J798 803 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 RASA4O43374 803 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 KDELR3O43731 214 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 ZMPSTE24O75844 475 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 IL1BP01584 269 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 ERCC2P18074 760 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 CDC25BP30305 580 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 OXTRP30559 389 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 SLC8A1P32418 973 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 ARL4AP40617 200 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 RECQLP46063 649 aaPredicted RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 NOP2P46087 812 aaKnown RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 SERPINH1P50454 418 aaKnown RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 TPMTP51580 245 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 ZNF135P52742 658 aaPredicted RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 CDH6P55285 790 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 YBEYP58557 167 aaPredicted RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 ARF5P84085 180 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 SLC25A11Q02978 314 aaKnown RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 ZBTB16Q05516 673 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 SLC20A2Q08357 652 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 ELAVL3Q14576 367 aaKnown RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 CST6Q15828 149 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 CCDC6Q16204 474 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 ZFYVE27Q5T4F4 411 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 CYP2U1Q7Z449 544 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 DSG4Q86SJ6 1040 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 TMTC1Q8IUR5 882 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 RHOT2Q8IXI1 618 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 TEKT4Q8WW24 435 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 RFFLQ8WZ73 363 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 OR8D1Q8WZ84 308 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 PIGKQ92643 395 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 HMCESQ96FZ2 354 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 TOE1Q96GM8 510 aaKnown RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 CELF6Q96J87 481 aaKnown RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 CCDC114Q96M63 670 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 FAM129BQ96TA1 746 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 GPR174Q9BXC1 333 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 TNKS2Q9H2K2 1166 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 PABPC3Q9H361 631 aaKnown RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 LUC7LQ9NQ29 371 aaKnown RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 CWC15Q9P013 229 aaKnown RBP9.42□□□□□ -0.9
HMGN1-202ENST00000380747 IMPACTQ9P2X3 320 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 LCMT1Q9UIC8 334 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 INTUQ9ULD6 942 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 PCDHA13Q9Y5I0 950 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 ACTL7AQ9Y615 435 aa9.42□□□□□ -0.9
HMGN1-202ENST00000380747 FLNBO75369 2602 aaKnown RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 ATXN2Q99700 1313 aaKnown RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 A0A1W2PP55 124 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 C1QTNF3-AMACRE9PGA6 284 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 MID1O15344 667 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 BUB1O43683 1085 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 RNASEH2AO75792 299 aaKnown RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 IPO7O95373 1038 aaKnown RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 AMPD1P23109 780 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 MPLP40238 635 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms