RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 AGAP2Q99490 1192 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 APOL2Q9BQE5 337 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 ANKRD6Q9Y2G4 727 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 PCDHB5Q9Y5E4 795 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 HS3ST4Q9Y661 456 aa21.87■■□□□ 1.09
TRIM54-202ENST00000380075 A0A1W2PPC1 479 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 CAPN14A8MX76 684 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 GYG2O15488 501 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 B4GALT3O60512 393 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 H2AFYO75367 372 aaKnown RBP21.86■■□□□ 1.09
TRIM54-202ENST00000380075 SERPINA6P08185 405 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 OR4Q2P0C623 313 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 CPA3P15088 417 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 OR1G1P47890 313 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 HSF5Q4G112 596 aaPredicted RBP21.86■■□□□ 1.09
TRIM54-202ENST00000380075 PPM1JQ5JR12 505 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 ARHGAP36Q6ZRI8 547 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 ALYREFQ86V81 257 aaKnown RBP21.86■■□□□ 1.09
TRIM54-202ENST00000380075 ARHGAP24Q8N264 748 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 CFAP61Q8NHU2 1237 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 USP33Q8TEY7 942 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 SLC39A13Q96H72 371 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 PBX4Q9BYU1 374 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.86■■□□□ 1.09
TRIM54-202ENST00000380075 UBP1Q9NZI7 540 aa21.86■■□□□ 1.09
TRIM54-202ENST00000380075 PPARGC1AQ9UBK2 798 aaKnown RBP21.86■■□□□ 1.09
TRIM54-202ENST00000380075 A0A096LPK6 155 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 C2orf71A6NGG8 1288 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 RALBP11234 206 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 KCNA4P22459 653 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 NMBRP28336 390 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 ACBD5Q5T8D3 534 aaPredicted RBP21.85■■□□□ 1.09
TRIM54-202ENST00000380075 CMC1Q7Z7K0 106 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 C10orf107Q8IVU9 208 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 PPHLN1Q8NEY8 458 aaKnown RBP21.85■■□□□ 1.09
TRIM54-202ENST00000380075 VPS39Q96JC1 886 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 GPR22Q99680 433 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 MIPEPQ99797 713 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 RHOJQ9H4E5 214 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 ZNF395Q9H8N7 513 aaPredicted RBP21.85■■□□□ 1.09
TRIM54-202ENST00000380075 IARS2Q9NSE4 1012 aaKnown RBP21.85■■□□□ 1.09
TRIM54-202ENST00000380075 IL37Q9NZH6 218 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 HCSTQ9UBK5 93 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 LMNAP02545 664 aaKnown RBP21.85■■□□□ 1.09
TRIM54-202ENST00000380075 KITP10721 976 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 TPH1P17752 444 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 HARS2P49590 506 aaKnown RBP21.85■■□□□ 1.09
TRIM54-202ENST00000380075 BTG3Q14201 252 aaPredicted RBP21.85■■□□□ 1.09
TRIM54-202ENST00000380075 TTC7BQ86TV6 843 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 CNTN4Q8IWV2 1026 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 OR6Y1Q8NGX8 325 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 CADM1Q9BY67 442 aaKnown RBP21.85■■□□□ 1.09
TRIM54-202ENST00000380075 MARCOQ9UEW3 520 aaPredicted RBP21.85■■□□□ 1.09
TRIM54-202ENST00000380075 DNAJC16Q9Y2G8 782 aa21.85■■□□□ 1.09
TRIM54-202ENST00000380075 YBX2Q9Y2T7 364 aaKnown RBP21.85■■□□□ 1.09
TRIM54-202ENST00000380075 COL4A6Q14031 1691 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 OR6C75A6NL08 312 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 GSC2O15499 205 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 TADA2AO75478 443 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 NEBLO76041 1014 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 MYL4P12829 197 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 ADRA1AP35348 466 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 PGFP49763 221 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 NDST2P52849 883 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 UMODL1-AS1Q8N2C9 162 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 SPATA22Q8NHS9 363 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 RDH11Q8TC12 318 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 RNPEPL1Q9HAU8 725 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 RBM22Q9NW64 420 aaKnown RBP eCLIP21.84■■□□□ 1.09
TRIM54-202ENST00000380075 PLXNA3P51805 1871 aa21.84■■□□□ 1.09
TRIM54-202ENST00000380075 ALOX15P16050 662 aaPredicted RBP21.83■■□□□ 1.09
TRIM54-202ENST00000380075 RHOQP17081 205 aa21.83■■□□□ 1.09
TRIM54-202ENST00000380075 CSRP3P50461 194 aa21.83■■□□□ 1.09
TRIM54-202ENST00000380075 PRKAA2P54646 552 aa21.83■■□□□ 1.09
TRIM54-202ENST00000380075 ABCE1P61221 599 aaKnown RBP21.83■■□□□ 1.09
TRIM54-202ENST00000380075 LRIT3Q3SXY7 679 aa21.83■■□□□ 1.09
TRIM54-202ENST00000380075 VARS2Q5ST30 1063 aaKnown RBP21.83■■□□□ 1.09
TRIM54-202ENST00000380075 IPMKQ8NFU5 416 aa21.83■■□□□ 1.09
TRIM54-202ENST00000380075 PRR11Q96HE9 360 aaPredicted RBP21.83■■□□□ 1.09
TRIM54-202ENST00000380075 RILPQ96NA2 401 aa21.83■■□□□ 1.09
TRIM54-202ENST00000380075 PGLYRP2Q96PD5 576 aa21.83■■□□□ 1.09
TRIM54-202ENST00000380075 PRKD2Q9BZL6 878 aa21.83■■□□□ 1.09
TRIM54-202ENST00000380075 OLA1Q9NTK5 396 aaKnown RBP21.83■■□□□ 1.09
TRIM54-202ENST00000380075 DNAJC28Q9NX36 388 aa21.83■■□□□ 1.09
TRIM54-202ENST00000380075 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.83■■□□□ 1.09
TRIM54-202ENST00000380075 TRIOBPQ9H2D6 2365 aa21.83■■□□□ 1.08
TRIM54-202ENST00000380075 FAM92AA1XBS5 289 aa21.83■■□□□ 1.08
TRIM54-202ENST00000380075 TMEM114B3SHH9 223 aa21.83■■□□□ 1.08
TRIM54-202ENST00000380075 ITM2AO43736 263 aa21.83■■□□□ 1.08
TRIM54-202ENST00000380075 ARHGEF15O94989 841 aa21.83■■□□□ 1.08
TRIM54-202ENST00000380075 MOCS2O96007 188 aaPredicted RBP21.83■■□□□ 1.08
TRIM54-202ENST00000380075 C2P06681 752 aa21.83■■□□□ 1.08
TRIM54-202ENST00000380075 CA3P07451 260 aa21.83■■□□□ 1.08
TRIM54-202ENST00000380075 PAMP19021 973 aa21.83■■□□□ 1.08
TRIM54-202ENST00000380075 PSEN1P49768 467 aa21.83■■□□□ 1.08
TRIM54-202ENST00000380075 TBX4P57082 545 aa21.83■■□□□ 1.08
TRIM54-202ENST00000380075 HNRNPDQ14103 355 aaKnown RBP21.83■■□□□ 1.08
TRIM54-202ENST00000380075 DENND5AQ6IQ26 1287 aa21.83■■□□□ 1.08
TRIM54-202ENST00000380075 ZC3HC1Q86WB0 502 aaKnown RBP21.83■■□□□ 1.08
TRIM54-202ENST00000380075 CMTR2Q8IYT2 770 aaKnown RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms