RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 CAMK1DQ8IU85 385 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 SFRP1Q8N474 314 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 FANK1Q8TC84 345 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 TBCKQ8TEA7 893 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 PCDHB18PQ96TA0 734 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 KATNAL1Q9BW62 490 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 CDADC1Q9BWV3 514 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 ING2Q9H160 280 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 MUC3BQ9H195 1237 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 C2orf40Q9H1Z8 148 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 GLTPQ9NZD2 209 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 AURKCQ9UQB9 309 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 COMMD10Q9Y6G5 202 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 USP6P35125 1406 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 LRRC72A6NJI9 287 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 PI15O43692 258 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 RNGTTO60942 597 aaKnown RBP8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 UPK1BO75841 260 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 SLITRK5O94991 958 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 TOP3BO95985 862 aaKnown RBP8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 CAPNS1P04632 268 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 YES1P07947 543 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 FDX1P10109 184 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 CLK1P49759 484 aaKnown RBP8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 AKR1D1P51857 326 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 SRP54P61011 504 aaKnown RBP8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 CHRNDQ07001 517 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 SLC12A1Q13621 1099 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 KNOP1Q1ED39 458 aaKnown RBP8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 YIF1BQ5BJH7 314 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 FAM209BQ5JX69 171 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 BROXQ5VW32 411 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 SULT1C3Q6IMI6 304 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 DPY19L3Q6ZPD9 716 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 OR8K3Q8NH51 312 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 DDX17Q92841 729 aaKnown RBP8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 WACQ9BTA9 647 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 DHRS4Q9BTZ2 278 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 BEX2Q9BXY8 128 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 GPR88Q9GZN0 384 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 EMC3Q9P0I2 261 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 DPP7Q9UHL4 492 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 CYB5R1Q9UHQ9 305 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 RNF112Q9ULX5 631 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 LMTK3Q96Q04 1460 aa8.62□□□□□ -1.03
NHLRC3-201ENST00000379599 PSME4Q14997 1843 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 CASZ1Q86V15 1759 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 IFNA14P01570 189 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 EPHX2P34913 555 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 GALNT3Q14435 633 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 SEMA3AQ14563 771 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 COLEC12Q5KU26 742 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 RNASEH2BQ5TBB1 312 aaKnown RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 ANKRD22Q5VYY1 191 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 RAP1GAP2Q684P5 730 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 ZNF773Q6PK81 442 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 BBS12Q6ZW61 710 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 KRT25Q7Z3Z0 450 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 PDIK1LQ8N165 341 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 DHRSXQ8N5I4 330 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 FAM71DQ8N9W8 422 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 OR6Q1Q8NGQ2 317 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 FBXW5Q969U6 566 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 CNDP2Q96KP4 475 aaKnown RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 MBOAT7Q96N66 472 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 APEX2Q9UBZ4 518 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 ENOPH1Q9UHY7 261 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 IPO11Q9UI26 975 aaKnown RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 CNOT6Q9ULM6 557 aaKnown RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 DIMT1Q9UNQ2 313 aaKnown RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 WBP11Q9Y2W2 641 aaKnown RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 FER1L4A9Z1Z3 1794 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 TMEM131LA2VDJ0 1609 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 CTDSP2O14595 271 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 PLD2O14939 933 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 RGS5O15539 181 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 SGPL1O95470 568 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 AMHP03971 560 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 MYL4P12829 197 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 ELK4P28324 431 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 IL12RB1P42701 662 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 FMO5P49326 533 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 HLCSP50747 726 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 HSPA2P54652 639 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 OLR1P78380 273 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 MRPS5P82675 430 aaKnown RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 MRPL28Q13084 256 aaKnown RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 ECM1Q16610 540 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 HIST2H2ACQ16777 129 aaPredicted RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 TTC39BQ5VTQ0 682 aaPredicted RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 MAVSQ7Z434 540 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 PCDH20Q8N6Y1 951 aaKnown RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 RDH13Q8NBN7 331 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 FAM83FQ8NEG4 500 aaPredicted RBP8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 NXPE3Q969Y0 559 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 TMEM80Q96HE8 168 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 B3GALT6Q96L58 329 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 UCK2Q9BZX2 261 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 CCDC90BQ9GZT6 254 aa8.61□□□□□ -1.03
NHLRC3-201ENST00000379599 TMEM117Q9H0C3 514 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms