RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 CD101Q93033 1021 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 SH3GL2Q99962 352 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 MLPHQ9BV36 600 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 SEZ6LQ9BYH1 1024 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 TMPRSS4Q9NRS4 437 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 RHBDL2Q9NX52 303 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 C15orf41Q9Y2V0 281 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 SHANK3Q9BYB0 1731 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 SNX3O60493 162 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 ZNF623O75123 536 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 GCATO75600 419 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 C1RP00736 705 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 CHRNA1P02708 482 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 CCL5P13501 91 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 TCN1P20061 433 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 SERPINA4P29622 427 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 COPAP53621 1224 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 HTRA3P83110 453 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 CAPRIN1Q14444 709 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 MTFR1Q15390 333 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 SWT1Q5T5J6 900 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 LRRC8BQ6P9F7 803 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 CMC1Q7Z7K0 106 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 SNRNP27Q8WVK2 155 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 HDAC10Q969S8 669 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 PAAF1Q9BRP4 392 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 CHRAC1Q9NRG0 131 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 ZBTB42B2RXF5 422 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 CLDN11O75508 207 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 METTL18O95568 372 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 ALADP13716 330 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 ZNF7P17097 686 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 TACR2P21452 398 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 SP100P23497 879 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 FMO4P31512 558 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 CREMQ03060 361 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 ADCK2Q7Z695 626 aa14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 CIR1Q86X95 450 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 NAF1Q96HR8 494 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 TSEN34Q9BSV6 310 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 AGO1Q9UL18 857 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-203ENST00000378679 MAST2Q6P0Q8 1798 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 FAM155BO75949 473 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 MT-CYBP00156 380 aaPredicted RBP14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 MLNP12872 115 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 SOX11P35716 441 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 SERPINB5P36952 375 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 YBEYP58557 167 aaPredicted RBP14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 RCN1Q15293 331 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 MFSD5Q6N075 450 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 OTOAQ7RTW8 1153 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 KCTD13Q8WZ19 329 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 IL1RL2Q9HB29 575 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 RXFP1Q9HBX9 757 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 MIOSQ9NXC5 875 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 CYTH4Q9UIA0 394 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 SYCE1LA8MT33 242 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 CASQ2O14958 399 aaPredicted RBP14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 DDX39BQ13838 428 aaKnown RBP14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 MARCH8Q5T0T0 291 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 PACS1Q6VY07 963 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 PCYOX1LQ8NBM8 494 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 SLC44A1Q8WWI5 657 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 NDNQ99608 321 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 VPS45Q9NRW7 570 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 RIC8BQ9NVN3 520 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 CHKBQ9Y259 395 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 H2AFYO75367 372 aaKnown RBP14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 SERPINB3P29508 390 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 IRF5Q13568 498 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 GALNT3Q14435 633 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 OR7D4Q8NG98 312 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 OR6K2Q8NGY2 324 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 NTAN1Q96AB6 310 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 MFSD3Q96ES6 412 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 BBS2Q9BXC9 721 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 OSBPL7Q9BZF2 842 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 TRIM15Q9C019 465 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 CFAP97Q9P2B7 532 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 ZNF711Q9Y462 761 aa14.36□□□□□ -0.11
SHROOM1-203ENST00000378679 MYH7BA7E2Y1 1941 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 PTGESO14684 152 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 ACSL4O60488 711 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 TMCC1O94876 653 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 CBX6O95503 412 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 CDK7P50613 346 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 ABCE1P61221 599 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 BST1Q10588 318 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 PRKAA1Q13131 559 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 KRT80Q6KB66 452 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 SLC41A1Q8IVJ1 513 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 GRIN3AQ8TCU5 1115 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 PIK3R5Q8WYR1 880 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 CATSPERZQ9NTU4 200 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 CNTN6Q9UQ52 1028 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 FCHO1O14526 889 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 AP2A1O95782 977 aa14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 ATP5BP06576 529 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-203ENST00000378679 CCDC166P0CW27 439 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms