RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 FAM46CQ5VWP2 391 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 C4orf19Q8IY42 314 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 FEM1CQ96JP0 617 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 NSMCE2Q96MF7 247 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 OSBPL2Q9H1P3 480 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 CD84Q9UIB8 345 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 MRPS7Q9Y2R9 242 aaKnown RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 DNALI1O14645 258 aaPredicted RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 EIF3HO15372 352 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 SLC28A2O43868 658 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 CXCR2P25025 360 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 PSMB4P28070 264 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 CTSOP43234 321 aaPredicted RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 MGAT5Q09328 741 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 CBX2Q14781 532 aaPredicted RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 AMZ1Q400G9 498 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 RGMBQ6NW40 437 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 METTL21AQ8WXB1 218 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 ARHGAP9Q9BRR9 750 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 ADGRB3O60242 1522 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 NEXMIFQ5QGS0 1516 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 CELF3Q5SZQ8 465 aaKnown RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 ESRP1Q6NXG1 681 aaKnown RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 ARMC8Q8IUR7 673 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 PHYKPLQ8IUZ5 450 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 SPATA6LQ8N4H0 392 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 OR4A15Q8NGL6 344 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 KLK6Q92876 244 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 LGMNQ99538 433 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 CPNE1Q99829 537 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 PDCD2LQ9BRP1 358 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 RPTORQ8N122 1335 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 MAGEB16A2A368 324 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 RHPN2P1A8MT19 583 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 PHGDHO43175 533 aaKnown RBP14.26□□□□□ -0.13
TRIM13-202ENST00000378182 MGRN1O60291 552 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 S100GP29377 79 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 SV2AQ7L0J3 742 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 GANQ9H2C0 597 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 WHRNQ9P202 907 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 ST3GAL5Q9UNP4 418 aa14.26□□□□□ -0.13
TRIM13-202ENST00000378182 ACSM2AQ08AH3 577 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 DUSP4Q13115 394 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 ACSM2BQ68CK6 577 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 RASSF6Q6ZTQ3 369 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 CCNJLQ8IV13 435 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 MARK1Q9P0L2 795 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 DMGDHQ9UI17 866 aaKnown RBP14.25□□□□□ -0.13
TRIM13-202ENST00000378182 IRF6O14896 467 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 TRIM3O75382 744 aaPredicted RBP14.25□□□□□ -0.13
TRIM13-202ENST00000378182 EIF4BP23588 611 aaKnown RBP14.25□□□□□ -0.13
TRIM13-202ENST00000378182 TAS2R41P59536 307 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 GRB14Q14449 540 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 RUBCNQ92622 972 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 MAGEB18Q96M61 343 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 CLCC1Q96S66 551 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 NRCAMQ92823 1304 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 LOC100506127A0A0U1RQW1 187 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 F8VZ95 297 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 FAIM2Q9BWQ8 316 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 SEMA6BQ9H3T3 888 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 VIPAS39Q9H9C1 493 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 A0A087X0B3 334 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 PGAM1P18669 254 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 IRF8Q02556 426 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 TRIM28Q13263 835 aaKnown RBP14.25□□□□□ -0.13
TRIM13-202ENST00000378182 MIEF2Q96C03 454 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 ZNF518BQ9C0D4 1074 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 RACGAP1Q9H0H5 632 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 OR12D3Q9UGF7 316 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 CCT8L1PA6NM43 557 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 DDX3XO00571 662 aaKnown RBP eCLIP14.25□□□□□ -0.137e-7■■□□□ 13.9
TRIM13-202ENST00000378182 BIRC5O15392 142 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 ECDO95905 644 aaPredicted RBP14.25□□□□□ -0.13
TRIM13-202ENST00000378182 FGBP02675 491 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 GIMD1P0DJR0 217 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 CNTFP26441 200 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 SLC6A3Q01959 620 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 MINDY4Q4G0A6 757 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 PTPN20Q4JDL3 420 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 RNASE12Q5GAN4 147 aaKnown RBP14.25□□□□□ -0.13
TRIM13-202ENST00000378182 GALNTL5Q7Z4T8 443 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 ITFG1Q8TB96 612 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 GPER1Q99527 375 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 KLHL4Q9C0H6 718 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 DPEP2Q9H4A9 486 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 GMEB2Q9UKD1 530 aa14.25□□□□□ -0.13
TRIM13-202ENST00000378182 LSM8O95777 96 aaKnown RBP14.24□□□□□ -0.13
TRIM13-202ENST00000378182 SYN1P17600 705 aa14.24□□□□□ -0.13
TRIM13-202ENST00000378182 EIF3MQ7L2H7 374 aaKnown RBP14.24□□□□□ -0.13
TRIM13-202ENST00000378182 HDDC3Q8N4P3 179 aa14.24□□□□□ -0.13
TRIM13-202ENST00000378182 LENG9Q96B70 501 aa14.24□□□□□ -0.13
TRIM13-202ENST00000378182 FRMD8Q9BZ67 464 aaPredicted RBP14.24□□□□□ -0.13
TRIM13-202ENST00000378182 TMEM138Q9NPI0 162 aa14.24□□□□□ -0.13
TRIM13-202ENST00000378182 BTBD7Q9P203 1132 aa14.24□□□□□ -0.13
TRIM13-202ENST00000378182 A0A087X1B8 175 aa14.24□□□□□ -0.13
TRIM13-202ENST00000378182 ELK3P41970 407 aa14.24□□□□□ -0.13
TRIM13-202ENST00000378182 OLFML2AQ68BL7 652 aa14.24□□□□□ -0.13
TRIM13-202ENST00000378182 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms