RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 C9orf72Q96LT7 481 aa21.42■■□□□ 1.02
RNF38-205ENST00000377877 WDR83Q9BRX9 315 aaKnown RBP21.42■■□□□ 1.02
RNF38-205ENST00000377877 TRPV4Q9HBA0 871 aa21.42■■□□□ 1.02
RNF38-205ENST00000377877 VPS28Q9UK41 221 aa21.42■■□□□ 1.02
RNF38-205ENST00000377877 INTS6Q9UL03 887 aaKnown RBP21.42■■□□□ 1.02
RNF38-205ENST00000377877 SMAPO00193 183 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 NDUFAB1O14561 156 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 USP12O75317 370 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 GJB3O75712 270 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 CPP00450 1065 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 TYRP14679 529 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 MAGEA4P43358 317 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 ATP1A2P50993 1020 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 NIPAL4Q0D2K0 466 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 EML3Q32P44 896 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 MCUQ8NE86 351 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 OSCP1Q8WVF1 389 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 OTUB2Q96DC9 234 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 FCRL5Q96RD9 977 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 PLA2G2FQ9BZM2 168 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 POMKQ9H5K3 350 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 PIH1D1Q9NWS0 290 aaKnown RBP21.41■■□□□ 1.02
RNF38-205ENST00000377877 FAM169AQ9Y6X4 670 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 SLC9A3R1O14745 358 aaPredicted RBP21.41■■□□□ 1.02
RNF38-205ENST00000377877 TRIM24O15164 1050 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 ALOX15BO15296 676 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 MYZAPP0CAP1 466 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 HLA-FP30511 346 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 ARL4CP56559 192 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 ITKQ08881 620 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 DHCR24Q15392 516 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 BBS9Q3SYG4 887 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 TMCO4Q5TGY1 634 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 TTC19Q6DKK2 380 aaPredicted RBP21.41■■□□□ 1.02
RNF38-205ENST00000377877 ANKMY2Q8IV38 441 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 IGDCC3Q8IVU1 814 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 NAT16Q8N8M0 369 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 NSMCE1Q8WV22 266 aa21.41■■□□□ 1.02
RNF38-205ENST00000377877 KIAA1522Q9P206 1035 aaPredicted RBP21.41■■□□□ 1.02
RNF38-205ENST00000377877 E7ESA3 106 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 NEBLO76041 1014 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 MT-CO1P00395 513 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 ARSAP15289 507 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 TNK2Q07912 1038 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 CYTH1Q15438 398 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 CENPUQ71F23 418 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 PRPF39Q86UA1 669 aaKnown RBP21.4■■□□□ 1.02
RNF38-205ENST00000377877 ZBED8Q8IZ13 594 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 UHMK1Q8TAS1 419 aaKnown RBP21.4■■□□□ 1.02
RNF38-205ENST00000377877 ZNF599Q96NL3 588 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 EPN3Q9H201 632 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 PABPC3Q9H361 631 aaKnown RBP21.4■■□□□ 1.02
RNF38-205ENST00000377877 ABCB8Q9NUT2 735 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 NINJ2Q9NZG7 142 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 UBA2Q9UBT2 640 aaPredicted RBP21.4■■□□□ 1.02
RNF38-205ENST00000377877 VPS51Q9UID3 782 aa21.4■■□□□ 1.02
RNF38-205ENST00000377877 OTOL1A6NHN0 477 aaPredicted RBP21.39■■□□□ 1.02
RNF38-205ENST00000377877 AP2A1O95782 977 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 GBP2P32456 591 aaPredicted RBP21.39■■□□□ 1.02
RNF38-205ENST00000377877 LSP1P33241 339 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 IFNAR2P48551 515 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 DSC2Q02487 901 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 SLC29A2Q14542 456 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 VITQ6UXI7 678 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 RELL1Q8IUW5 271 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 KLHDC8BQ8IXV7 354 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 PDIK1LQ8N165 341 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 OR2W6PQ8NHA6 318 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 RIPOR3Q96MK2 946 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 APOL2Q9BQE5 337 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 EBF3Q9H4W6 596 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 ZFP14Q9HCL3 533 aa21.39■■□□□ 1.02
RNF38-205ENST00000377877 EIF2B3Q9NR50 452 aaKnown RBP21.39■■□□□ 1.02
RNF38-205ENST00000377877 RIPK2O43353 540 aa21.39■■□□□ 1.01
RNF38-205ENST00000377877 CYP17A1P05093 508 aa21.39■■□□□ 1.01
RNF38-205ENST00000377877 MMP2P08253 660 aa21.39■■□□□ 1.01
RNF38-205ENST00000377877 LAMP2P13473 410 aa21.39■■□□□ 1.01
RNF38-205ENST00000377877 SKIDA1Q1XH10 827 aa21.39■■□□□ 1.01
RNF38-205ENST00000377877 CCDC117Q8IWD4 279 aaPredicted RBP21.39■■□□□ 1.01
RNF38-205ENST00000377877 ARRDC2Q8TBH0 407 aa21.39■■□□□ 1.01
RNF38-205ENST00000377877 NSMCE3Q96MG7 304 aa21.39■■□□□ 1.01
RNF38-205ENST00000377877 RPP25Q9BUL9 199 aaKnown RBP21.39■■□□□ 1.01
RNF38-205ENST00000377877 SLC25A51Q9H1U9 297 aa21.39■■□□□ 1.01
RNF38-205ENST00000377877 LRRC4CQ9HCJ2 640 aa21.39■■□□□ 1.01
RNF38-205ENST00000377877 MARK1Q9P0L2 795 aa21.39■■□□□ 1.01
RNF38-205ENST00000377877 ACSL3O95573 720 aa21.38■■□□□ 1.01
RNF38-205ENST00000377877 TTC4O95801 387 aa21.38■■□□□ 1.01
RNF38-205ENST00000377877 MDH1P40925 334 aaKnown RBP21.38■■□□□ 1.01
RNF38-205ENST00000377877 MAGEA3P43357 314 aa21.38■■□□□ 1.01
RNF38-205ENST00000377877 RGRP47804 291 aa21.38■■□□□ 1.01
RNF38-205ENST00000377877 CDK16Q00536 496 aa21.38■■□□□ 1.01
RNF38-205ENST00000377877 PLEKHG6Q3KR16 790 aa21.38■■□□□ 1.01
RNF38-205ENST00000377877 PARM1Q6UWI2 310 aa21.38■■□□□ 1.01
RNF38-205ENST00000377877 MICALCLQ6ZW33 695 aa21.38■■□□□ 1.01
RNF38-205ENST00000377877 MPP5Q8N3R9 675 aa21.38■■□□□ 1.01
RNF38-205ENST00000377877 IMP4Q96G21 291 aaKnown RBP21.38■■□□□ 1.01
RNF38-205ENST00000377877 FAM83CQ9BQN1 747 aa21.38■■□□□ 1.01
RNF38-205ENST00000377877 NFS1Q9Y697 457 aa21.38■■□□□ 1.01
RNF38-205ENST00000377877 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.38■■□□□ 1.01
RNF38-205ENST00000377877 H3BQ06 376 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms