RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 RDH11Q8TC12 318 aa13.42□□□□□ -0.26
ACTN1-202ENST00000376839 TMA16Q96EY4 203 aaKnown RBP13.42□□□□□ -0.26
ACTN1-202ENST00000376839 TEKT5Q96M29 485 aa13.42□□□□□ -0.26
ACTN1-202ENST00000376839 SLC9A7Q96T83 725 aa13.42□□□□□ -0.26
ACTN1-202ENST00000376839 VPS28Q9UK41 221 aa13.42□□□□□ -0.26
ACTN1-202ENST00000376839 APPL1Q9UKG1 709 aa13.42□□□□□ -0.26
ACTN1-202ENST00000376839 MAGEB16A2A368 324 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 USP17L7P0C7H9 530 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 MYBPC1Q00872 1141 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 PPIL2Q13356 520 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 C6orf52Q5T4I8 152 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 ARMC3Q5W041 872 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 ITPRIPL1Q6GPH6 555 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 GALNT4Q8N4A0 578 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 CCNYL1Q8N7R7 359 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 PIP4K2CQ8TBX8 421 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 EDEM1Q92611 657 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 NXNL1Q96CM4 212 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 EPAS1Q99814 870 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 FTHL17Q9BXU8 183 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 CRTAC1Q9NQ79 661 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 TRHDEQ9UKU6 1024 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 LZTS1Q9Y250 596 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 ANKRD6Q9Y2G4 727 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 PRSS51A0A1B0GVH4 220 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 TCAF2A6NFQ2 919 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 VILLO15195 856 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 NCAM2O15394 837 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 YBX3P16989 372 aaKnown RBP eCLIP13.41□□□□□ -0.269e-8■■■□□ 15.8
ACTN1-202ENST00000376839 ME2P23368 584 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 CDH17Q12864 832 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 ART3Q13508 389 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 SLC12A1Q13621 1099 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 SLC5A9Q2M3M2 681 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 UBXN11Q5T124 520 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 PAOXQ6QHF9 649 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 KDM1BQ8NB78 822 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 DPF3Q92784 378 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 SGF29Q96ES7 293 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 TSNARE1Q96NA8 513 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 GPR78Q96P69 363 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 KIFC1Q9BW19 673 aa13.41□□□□□ -0.26
ACTN1-202ENST00000376839 ACOT8O14734 319 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 LRIG2O94898 1065 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 CLPTM1O96005 669 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 FAM200BP0CF97 657 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 SRGAP2BP0DMP2 458 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 ATP6V1B1P15313 513 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 KCNE1P15382 129 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 LAMB3Q13751 1172 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 POU6F1Q14863 301 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 ZFP1Q6P2D0 407 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 RBM44Q6ZP01 1051 aaKnown RBP13.4□□□□□ -0.26
ACTN1-202ENST00000376839 ARHGAP36Q6ZRI8 547 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 SETD3Q86TU7 594 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-202ENST00000376839 SHCBP1Q8NEM2 672 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 OR6J1Q8NGC5 347 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 ZNF419Q96HQ0 510 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-202ENST00000376839 SMOQ99835 787 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 EPB41L1Q9H4G0 881 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 RAB26Q9ULW5 256 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 GNEQ9Y223 722 aaKnown RBP13.4□□□□□ -0.26
ACTN1-202ENST00000376839 RAD54BQ9Y620 910 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 BCAS2O75934 225 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-202ENST00000376839 VAPBO95292 243 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 MT-CYBP00156 380 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-202ENST00000376839 CYP2C9P11712 490 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.4□□□□□ -0.26
ACTN1-202ENST00000376839 NADK2Q4G0N4 442 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 FAM219BQ5XKK7 198 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 ZNF280DQ6N043 979 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 IYDQ6PHW0 289 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 GK5Q6ZS86 529 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 TOP6BLQ8N6T0 577 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 ZMIZ2Q8NF64 920 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 MPP4Q96JB8 637 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 COLEC11Q9BWP8 271 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 GRIP2Q9C0E4 1043 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 VTI1BQ9UEU0 232 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 MRPL42Q9Y6G3 142 aaKnown RBP13.4□□□□□ -0.26
ACTN1-202ENST00000376839 SCN4AP35499 1836 aa13.4□□□□□ -0.26
ACTN1-202ENST00000376839 NEMP2A6NFY4 417 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 SLC22A2O15244 555 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 MTSS1O43312 755 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 TADA2AO75478 443 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 RNASEH2AO75792 299 aaKnown RBP13.4□□□□□ -0.27
ACTN1-202ENST00000376839 ARNTP27540 789 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 GJA5P36382 358 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 HADHAP40939 763 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 RPL5P46777 297 aaKnown RBP13.4□□□□□ -0.27
ACTN1-202ENST00000376839 HCAR3P49019 387 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 HERC3Q15034 1050 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 DGKDQ16760 1214 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 XKR4Q5GH76 650 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 NAPEPLDQ6IQ20 393 aa13.4□□□□□ -0.27
ACTN1-202ENST00000376839 ESRP1Q6NXG1 681 aaKnown RBP13.4□□□□□ -0.27
ACTN1-202ENST00000376839 PTAR1Q7Z6K3 402 aaPredicted RBP13.4□□□□□ -0.27
ACTN1-202ENST00000376839 TXNDC5Q8NBS9 432 aaKnown RBP13.4□□□□□ -0.27
ACTN1-202ENST00000376839 PDCD6IPQ8WUM4 868 aaKnown RBP13.4□□□□□ -0.27
ACTN1-202ENST00000376839 DNAJB3Q8WWF6 145 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms