RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 FREM2Q5SZK8 3169 aa15.04■□□□□ -0
HDAC6-204ENST00000376643 NEMP1O14524 444 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 FPGTO14772 594 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 SMAD6O43541 496 aaKnown RBP15.03■□□□□ -0
HDAC6-204ENST00000376643 RAMP2O60895 175 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 SDC3O75056 442 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 MMEP08473 750 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 PRLRP16471 622 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 RHOQP17081 205 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 MMP8P22894 467 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 GLDCP23378 1020 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 STAT1P42224 750 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 PTPN9P43378 593 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 NSFP46459 744 aaKnown RBP15.03■□□□□ -0
HDAC6-204ENST00000376643 CCNHP51946 323 aaPredicted RBP15.03■□□□□ -0
HDAC6-204ENST00000376643 ATP11AP98196 1134 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 COL9A2Q14055 689 aaPredicted RBP15.03■□□□□ -0
HDAC6-204ENST00000376643 TMEM259Q4ZIN3 620 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 RWDD4Q6NW29 188 aaKnown RBP15.03■□□□□ -0
HDAC6-204ENST00000376643 PTAR1Q7Z6K3 402 aaPredicted RBP15.03■□□□□ -0
HDAC6-204ENST00000376643 DRC7Q8IY82 874 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 LSMEM2Q8N112 164 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 CHST14Q8NCH0 376 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 ASB12Q8WXK4 309 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 TBC1D31Q96DN5 1066 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 SLC17A9Q9BYT1 436 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 TNKS2Q9H2K2 1166 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 ANLNQ9NQW6 1124 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 IPO11Q9UI26 975 aaKnown RBP15.03■□□□□ -0
HDAC6-204ENST00000376643 WASF2Q9Y6W5 498 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 ADAMTS20P59510 1910 aa15.03■□□□□ -0
HDAC6-204ENST00000376643 URB1O60287 2271 aaKnown RBP15.03■□□□□ -0
HDAC6-204ENST00000376643 I6L893 689 aaPredicted RBP15.02■□□□□ -0
HDAC6-204ENST00000376643 TOR1BO14657 336 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 SIGLEC6O43699 453 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 ZMPSTE24O75844 475 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 PIAS2O75928 621 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 GSRP00390 522 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 CYP1A1P04798 512 aaPredicted RBP15.02■□□□□ -0
HDAC6-204ENST00000376643 CALB1P05937 261 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 CCDC172P0C7W6 258 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 CKMT1AP12532 417 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 ADRA1BP35368 520 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 SOX5P35711 763 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 AIF1P55008 147 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 GSCP56915 257 aaPredicted RBP15.02■□□□□ -0
HDAC6-204ENST00000376643 HSP90AA4PQ58FG1 418 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 DPY19L2P1Q6NXN4 242 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 PPP1R2P3Q6NXS1 205 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 Q6ZSR6 202 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 PARGQ86W56 976 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 RYBPQ8N488 228 aaPredicted RBP15.02■□□□□ -0
HDAC6-204ENST00000376643 DCBLD1Q8N8Z6 715 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 FAM181AQ8N9Y4 354 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 OR13H1Q8NG92 308 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 SNIP1Q8TAD8 396 aaKnown RBP15.02■□□□□ -0
HDAC6-204ENST00000376643 BTN2A2Q8WVV5 523 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 GRAMD1AQ96CP6 724 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 DCBLD2Q96PD2 775 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 LENG8Q96PV6 779 aaPredicted RBP15.02■□□□□ -0
HDAC6-204ENST00000376643 DEPDC7Q96QD5 511 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 MYOCQ99972 504 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 ZDHHC6Q9H6R6 413 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 TMEM248Q9NWD8 314 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 HECAQ9UBI9 543 aaPredicted RBP15.02■□□□□ -0
HDAC6-204ENST00000376643 ZNF212Q9UDV6 495 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 FADS3Q9Y5Q0 445 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 SNX10Q9Y5X0 201 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 CSNK1G3Q9Y6M4 447 aa15.02■□□□□ -0
HDAC6-204ENST00000376643 SCAMP1O15126 338 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 GFPT2O94808 682 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 POP4O95707 220 aaKnown RBP15.01□□□□□ -0.01
HDAC6-204ENST00000376643 KRT3P12035 628 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 SUOXP51687 545 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 POLR2FP61218 127 aaKnown RBP15.01□□□□□ -0.01
HDAC6-204ENST00000376643 ARF5P84085 180 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 SEMG2Q02383 582 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-204ENST00000376643 PTK2BQ14289 1009 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 CDO1Q16878 200 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 ZNF805Q5CZA5 627 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 GCNT7Q6ZNI0 430 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 OR2AP1Q8NGE2 309 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 RXFP2Q8WXD0 754 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 KLK6Q92876 244 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 FGF11Q92914 225 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 ARHGEF2Q92974 986 aaKnown RBP15.01□□□□□ -0.01
HDAC6-204ENST00000376643 GLMNQ92990 594 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 NTAN1Q96AB6 310 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 GDAP1L1Q96MZ0 367 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 UBL7Q96S82 380 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-204ENST00000376643 SELENOOQ9BVL4 669 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 ABCG4Q9H172 646 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 SAMSN1Q9NSI8 373 aaKnown RBP15.01□□□□□ -0.01
HDAC6-204ENST00000376643 DNAJC28Q9NX36 388 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 TAB2Q9NYJ8 693 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 NOCTQ9UK39 431 aaKnown RBP15.01□□□□□ -0.01
HDAC6-204ENST00000376643 ZFR2Q9UPR6 939 aaKnown RBP15.01□□□□□ -0.01
HDAC6-204ENST00000376643 CA5BQ9Y2D0 317 aa15.01□□□□□ -0.01
HDAC6-204ENST00000376643 WDFY3Q8IZQ1 3526 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms