RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CR2P20023 1033 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 SLCO1A2P46721 670 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 CSNK1DP48730 415 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 SGSHP51688 502 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 MSLNQ13421 630 aaPredicted RBP11.29□□□□□ -0.6
PDPN-202ENST00000376057 KBTBD12Q3ZCT8 623 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 HP1BP3Q5SSJ5 553 aaPredicted RBP11.29□□□□□ -0.6
PDPN-202ENST00000376057 CIR1Q86X95 450 aaPredicted RBP11.29□□□□□ -0.6
PDPN-202ENST00000376057 PGBD5Q8N414 524 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 NSMCE4AQ9NXX6 385 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.29□□□□□ -0.6
PDPN-202ENST00000376057 CFAP97Q9P2B7 532 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 UBA2Q9UBT2 640 aaPredicted RBP11.29□□□□□ -0.6
PDPN-202ENST00000376057 CKMP06732 381 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 EPCAMP16422 314 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 VASPP50552 380 aaPredicted RBP11.28□□□□□ -0.6
PDPN-202ENST00000376057 SLC20A2Q08357 652 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 GPR158Q5T848 1215 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 NLRP9Q7RTR0 991 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 DCAF4L2Q8NA75 395 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 OR52K2Q8NGK3 314 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 CDKL2Q92772 493 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 ACDQ96AP0 544 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 CFAP36Q96G28 342 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 C19orf43Q9BQ61 176 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 FEM1AQ9BSK4 669 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 MARK1Q9P0L2 795 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 MSRAQ9UJ68 235 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 A0A0D9SEW6 157 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 ZCWPW2A0A1B0GU75 182 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 TBL1XO60907 577 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 NEBLO76041 1014 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 PENKP01210 267 aaPredicted RBP11.28□□□□□ -0.6
PDPN-202ENST00000376057 IRF1P10914 325 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 ADRA1DP25100 572 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 GYS2P54840 703 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 MGAT5Q09328 741 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 FAM109BQ6ICB4 259 aaPredicted RBP11.28□□□□□ -0.6
PDPN-202ENST00000376057 PKN3Q6P5Z2 889 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 SH2D5Q6ZV89 423 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 NT5MQ9NPB1 228 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 TDP1Q9NUW8 608 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 MAD1L1Q9Y6D9 718 aa11.28□□□□□ -0.6
PDPN-202ENST00000376057 GRXCR1A8MXD5 290 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 HLA-DPA1P20036 260 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 WNT3AP56704 352 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 SLC18A2Q05940 514 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 ZNF77Q15935 545 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 ANKRD20A4Q4UJ75 823 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 SYCP2LQ5T4T6 812 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 RNF219Q5W0B1 726 aaPredicted RBP11.27□□□□□ -0.6
PDPN-202ENST00000376057 GALNT7Q86SF2 657 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 CNTN4Q8IWV2 1026 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 DNAAF3Q8N9W5 541 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.27□□□□□ -0.6
PDPN-202ENST00000376057 SPATA22Q8NHS9 363 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 USP33Q8TEY7 942 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 ABHD8Q96I13 439 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 NUDCD1Q96RS6 583 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 MCMBPQ9BTE3 642 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 SFXN1Q9H9B4 322 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 SMPD4Q9NXE4 827 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 KIAA1522Q9P206 1035 aaPredicted RBP11.27□□□□□ -0.6
PDPN-202ENST00000376057 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 CTNNAL1Q9UBT7 734 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 HCFC2Q9Y5Z7 792 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 IKBKGQ9Y6K9 419 aa11.27□□□□□ -0.6
PDPN-202ENST00000376057 KIF26AQ9ULI4 1882 aaPredicted RBP11.27□□□□□ -0.6
PDPN-202ENST00000376057 POC1B-GALNT4F8VUJ3 575 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 NRG2O14511 850 aaPredicted RBP11.27□□□□□ -0.61
PDPN-202ENST00000376057 KRT37O76014 449 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 INHBAP08476 426 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 ALADP13716 330 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 AVPR1AP37288 418 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 POLD2P49005 469 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 SESN2P58004 480 aaPredicted RBP11.27□□□□□ -0.61
PDPN-202ENST00000376057 SPARCL1Q14515 664 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 DMC1Q14565 340 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 ZNF235Q14590 738 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 CYTH1Q15438 398 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 TEAD2Q15562 447 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 IL31Q6EBC2 164 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 KIAA0907Q7Z7F0 614 aaPredicted RBP11.27□□□□□ -0.61
PDPN-202ENST00000376057 TDRD5Q8NAT2 981 aaKnown RBP11.27□□□□□ -0.61
PDPN-202ENST00000376057 USP13Q92995 863 aaPredicted RBP11.27□□□□□ -0.61
PDPN-202ENST00000376057 ISL2Q96A47 359 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 PABPC5Q96DU9 382 aaKnown RBP11.27□□□□□ -0.61
PDPN-202ENST00000376057 SGSM3Q96HU1 749 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 PBX4Q9BYU1 374 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 SLC2A11Q9BYW1 496 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 HCFC1R1Q9NWW0 138 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 OBP2AQ9NY56 170 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 H0Y626 953 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 SLC9A3R1O14745 358 aaPredicted RBP11.27□□□□□ -0.61
PDPN-202ENST00000376057 RFPL2O75678 378 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 KRT38O76015 456 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 CD160O95971 181 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 MT-CYBP00156 380 aaPredicted RBP11.27□□□□□ -0.61
PDPN-202ENST00000376057 CYBBP04839 570 aa11.27□□□□□ -0.61
PDPN-202ENST00000376057 SNRPAP09012 282 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms