RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 CITO14578 2027 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 NUP205Q92621 2012 aa15.42■□□□□ 0.06
MSH5-203ENST00000375750 RGSL1A5PLK6 1076 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 MATN2O00339 956 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 DENRO43583 198 aaKnown RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 RNASEH2AO75792 299 aaKnown RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 CTSHP09668 335 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 RPL10P27635 214 aaKnown RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 TKTP29401 623 aaKnown RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 CYLC2Q14093 348 aaPredicted RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 OTUD1Q5VV17 481 aaPredicted RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 HFE2Q6ZVN8 426 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
MSH5-203ENST00000375750 KCTD4Q8WVF5 259 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 SCYL1Q96KG9 808 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 ILKAPQ9H0C8 392 aaPredicted RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 PCDHAC1Q9H158 963 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 SPC25Q9HBM1 224 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 KIAA1257Q9ULG3 409 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 VANGL2Q9ULK5 521 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 SMIM31A0A1B0GVY4 71 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 ZBTB24O43167 697 aaPredicted RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 BEST1O76090 585 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 THRAP10827 490 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 PRKAR2AP13861 404 aaKnown RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 TFEBP19484 476 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 IGFBP6P24592 240 aaPredicted RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 NMBRP28336 390 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 SPRP35270 261 aaPredicted RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 ZBTB6Q15916 424 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 DEFB115Q30KQ5 88 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 SLC26A9Q7LBE3 791 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 ATP6V1E2Q96A05 226 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 TMIGD2Q96BF3 282 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 ACE2Q9BYF1 805 aaPredicted RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 WDR41Q9HAD4 459 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 LMCD1Q9NZU5 365 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 ASGR1P07306 291 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 DESP17661 470 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 MAGEA12P43365 314 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 SCNN1BP51168 640 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 PCBP1Q15365 356 aaKnown RBP eCLIP15.41■□□□□ 0.068e-7■■■■□ 25
MSH5-203ENST00000375750 KCNA10Q16322 511 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 ZNF280DQ6N043 979 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 FAM43BQ6ZT52 329 aaPredicted RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 CLEC14AQ86T13 490 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 NT5DC4Q86YG4 428 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 TMEM151AQ8N4L1 468 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 ARRDC4Q8NCT1 418 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 GOLGA2P5Q9HBQ8 144 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 OXSMQ9NWU1 459 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 C6orf203Q9P0P8 240 aaPredicted RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 GMPR2Q9P2T1 348 aaKnown RBP15.41■□□□□ 0.06
MSH5-203ENST00000375750 PHF24Q9UPV7 400 aa15.41■□□□□ 0.06
MSH5-203ENST00000375750 I6L893 689 aaPredicted RBP15.4■□□□□ 0.06
MSH5-203ENST00000375750 SPTLC1O15269 473 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 ADAMTS4O75173 837 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 AXLP30530 894 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 ADIGQ0VDE8 80 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 IL23RQ5VWK5 629 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 SEL1L3Q68CR1 1132 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 TAF2Q6P1X5 1199 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 GK5Q6ZS86 529 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 LSMEM2Q8N112 164 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 CCNYL1Q8N7R7 359 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 FAM110BQ8TC76 370 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 VPS39Q96JC1 886 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 SENP6Q9GZR1 1112 aaPredicted RBP15.4■□□□□ 0.06
MSH5-203ENST00000375750 RBM38Q9H0Z9 239 aaKnown RBP15.4■□□□□ 0.06
MSH5-203ENST00000375750 RHBDL2Q9NX52 303 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 GALNT8Q9NY28 637 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 IPPQ9Y573 584 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 SMIM28A0A1B0GU29 152 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 AP1G1O43747 822 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 KPNA6O60684 536 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 PTPN3P26045 913 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 PRDX6P30041 224 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 RPL14P50914 215 aaKnown RBP15.4■□□□□ 0.06
MSH5-203ENST00000375750 MPP3Q13368 585 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 MAP7Q14244 749 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 SPANXN3Q5MJ09 141 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 RARS2Q5T160 578 aaKnown RBP15.4■□□□□ 0.06
MSH5-203ENST00000375750 TWF2Q6IBS0 349 aaKnown RBP15.4■□□□□ 0.06
MSH5-203ENST00000375750 KCNMB4Q86W47 210 aa15.4■□□□□ 0.06
MSH5-203ENST00000375750 SMG8Q8ND04 991 aaKnown RBP15.4■□□□□ 0.06
MSH5-203ENST00000375750 MLPHQ9BV36 600 aaPredicted RBP15.4■□□□□ 0.06
MSH5-203ENST00000375750 MRPL1Q9BYD6 325 aaKnown RBP15.4■□□□□ 0.06
MSH5-203ENST00000375750 UPF3AQ9H1J1 476 aaKnown RBP15.4■□□□□ 0.06
MSH5-203ENST00000375750 RUVBL2Q9Y230 463 aaKnown RBP15.4■□□□□ 0.06
MSH5-203ENST00000375750 M0QYT0 321 aa15.39■□□□□ 0.05
MSH5-203ENST00000375750 HDAC3O15379 428 aa15.39■□□□□ 0.05
MSH5-203ENST00000375750 TOMM70O94826 608 aa15.39■□□□□ 0.05
MSH5-203ENST00000375750 ACAT1P24752 427 aaKnown RBP15.39■□□□□ 0.05
MSH5-203ENST00000375750 CD68P34810 354 aaPredicted RBP15.39■□□□□ 0.05
MSH5-203ENST00000375750 NUMBP49757 651 aa15.39■□□□□ 0.05
MSH5-203ENST00000375750 B3GNT6Q6ZMB0 384 aa15.39■□□□□ 0.05
MSH5-203ENST00000375750 TICAM1Q8IUC6 712 aa15.39■□□□□ 0.05
MSH5-203ENST00000375750 SLC41A1Q8IVJ1 513 aa15.39■□□□□ 0.05
MSH5-203ENST00000375750 FAM96AQ9H5X1 160 aa15.39■□□□□ 0.05
MSH5-203ENST00000375750 LRRC40Q9H9A6 602 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms