RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 KLHL3Q9UH77 587 aa17.35■□□□□ 0.37
MCF2L-203ENST00000375604 KDM4FA0A1W2PPD8 638 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 LIASO43766 372 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 ETNPPLQ8TBG4 499 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 L2HGDHQ9H9P8 463 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 SNX10Q9Y5X0 201 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 SPATA31C2B4DYI2 1134 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 TREHO43280 583 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 CNPP09543 421 aaKnown RBP17.34■□□□□ 0.37
MCF2L-203ENST00000375604 MYBPC2Q14324 1141 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 EID3Q8N140 333 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 OR6Y1Q8NGX8 325 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 RPLP2P05387 115 aaKnown RBP17.34■□□□□ 0.37
MCF2L-203ENST00000375604 ZNF143P52747 638 aaPredicted RBP17.34■□□□□ 0.37
MCF2L-203ENST00000375604 SRSF11Q05519 484 aaKnown RBP17.34■□□□□ 0.37
MCF2L-203ENST00000375604 SEMA5AQ13591 1074 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 LINGO4Q6UY18 593 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 CREG2Q8IUH2 290 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 CHPFQ8IZ52 775 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 WDR36Q8NI36 951 aaKnown RBP17.34■□□□□ 0.37
MCF2L-203ENST00000375604 BTBD10Q9BSF8 475 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 MAT2BQ9NZL9 334 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 SLCO1B7G3V0H7 640 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 VAV1P15498 845 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 DGKAP23743 735 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 GTF2BQ00403 316 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 FMO1Q01740 532 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 EIF2B5Q13144 721 aaKnown RBP17.34■□□□□ 0.37
MCF2L-203ENST00000375604 RRP1BQ14684 758 aaKnown RBP17.34■□□□□ 0.37
MCF2L-203ENST00000375604 ZCCHC9Q8N567 271 aaKnown RBP17.34■□□□□ 0.37
MCF2L-203ENST00000375604 CXorf40BQ96DE9 158 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 LPIN3Q9BQK8 851 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 GNPTGQ9UJJ9 305 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 ENTPD4Q9Y227 616 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 SPATA31C1P0DKV0 1188 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 FASP25445 335 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 LRPAP1P30533 357 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 S100A3P33764 101 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 HSDL1Q3SXM5 330 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 FBXO48Q5FWF7 155 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 DNAJB14Q8TBM8 379 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 PANX3Q96QZ0 392 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 GANQ9H2C0 597 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 HIPK3Q9H422 1215 aa17.34■□□□□ 0.37
MCF2L-203ENST00000375604 PPLO60437 1756 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 PIPSLA2A3N6 862 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 SLC15A5A6NIM6 579 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 PPP1R11O60927 126 aaPredicted RBP17.33■□□□□ 0.37
MCF2L-203ENST00000375604 ZNF37AP17032 561 aaPredicted RBP17.33■□□□□ 0.37
MCF2L-203ENST00000375604 XKR6Q5GH73 641 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 PCID2Q5JVF3 399 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 NEPROQ6NW34 567 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 CCDC149Q6ZUS6 474 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 ST13P5Q8NFI4 369 aaPredicted RBP17.33■□□□□ 0.37
MCF2L-203ENST00000375604 PAPOLBQ9NRJ5 636 aaKnown RBP17.33■□□□□ 0.37
MCF2L-203ENST00000375604 KLHL28Q9NXS3 571 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 VTI1BQ9UEU0 232 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 RPL22P35268 128 aaKnown RBP17.33■□□□□ 0.37
MCF2L-203ENST00000375604 HSPA13P48723 471 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 KCNA10Q16322 511 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 JOSD2Q8TAC2 188 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 FEM1CQ96JP0 617 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 DCUN1D5Q9BTE7 237 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 OSBPL6Q9BZF3 934 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 FAM105AQ9NUU6 356 aa17.33■□□□□ 0.37
MCF2L-203ENST00000375604 ATXN2Q99700 1313 aaKnown RBP17.33■□□□□ 0.36
MCF2L-203ENST00000375604 FARP2O94887 1054 aaPredicted RBP17.33■□□□□ 0.36
MCF2L-203ENST00000375604 HNRNPLP14866 589 aaKnown RBP eCLIP17.33■□□□□ 0.365e-9■■■■■ 27.5
MCF2L-203ENST00000375604 SMAD3P84022 425 aaKnown RBP17.33■□□□□ 0.36
MCF2L-203ENST00000375604 TAF13Q15543 124 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 RFWD3Q6PCD5 774 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 CYP4Z2PQ8N1L4 340 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 LZTR1Q8N653 840 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 ITFG1Q8TB96 612 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 UROC1Q96N76 676 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 LYPLA1O75608 230 aaPredicted RBP17.33■□□□□ 0.36
MCF2L-203ENST00000375604 KCNH1O95259 989 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 CYP1A2P05177 515 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 ZIK1Q3SY52 487 aaPredicted RBP17.33■□□□□ 0.36
MCF2L-203ENST00000375604 TTMPQ5BVD1 217 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 C9orf57Q5W0N0 161 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 UTS2BQ765I0 119 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 C7orf61Q8IZ16 206 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 SH3GL1Q99961 368 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 PHACTR1Q9C0D0 580 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 OSER1Q9NX31 292 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 CFAP97Q9P2B7 532 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 IQCMA0A1B0GVH7 501 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 CNOT3O75175 753 aaKnown RBP17.33■□□□□ 0.36
MCF2L-203ENST00000375604 PCCBP05166 539 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 FKBP1AP62942 108 aaKnown RBP17.33■□□□□ 0.36
MCF2L-203ENST00000375604 MRPS22P82650 360 aaKnown RBP17.33■□□□□ 0.36
MCF2L-203ENST00000375604 COX10Q12887 443 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 CYP2A13Q16696 494 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 STXBP5Q5T5C0 1151 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 SLC30A9Q6PML9 568 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 OTOP3Q7RTS5 596 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 PRKD2Q9BZL6 878 aa17.33■□□□□ 0.36
MCF2L-203ENST00000375604 ISM1B1AKI9 464 aa17.32■□□□□ 0.36
MCF2L-203ENST00000375604 BTBD19C9JJ37 291 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms