RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 RIT2Q99578 217 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 C1orf50Q9BV19 199 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 DDX47Q9H0S4 455 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 B3GAT2Q9NPZ5 323 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TMPRSS11EQ9UL52 423 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ERGIC3Q9Y282 383 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TTC3P53804 2025 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 UMODL1Q5DID0 1318 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TRIM64CA6NLI5 447 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TNFRSF10BO14763 440 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 PGRMC2O15173 223 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 DBTP11182 482 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CHN1P15882 459 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ATP5A1P25705 553 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CDC42P60953 191 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SLC20A2Q08357 652 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 FAM189A2Q15884 450 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 RFTN2Q52LD8 501 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SBK1Q52WX2 424 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SNAP47Q5SQN1 464 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SUSD4Q5VX71 490 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TTI2Q6NXR4 508 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TRIM40Q6P9F5 258 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ILDR2Q71H61 639 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 LPCAT2Q7L5N7 544 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 HEATR4Q86WZ0 1026 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 FIBCD1Q8N539 461 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SRFBP1Q8NEF9 429 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 KAT2BQ92831 832 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 NKD1Q969G9 470 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ZFRQ96KR1 1074 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TMEM68Q96MH6 324 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ZNF558Q96NG5 402 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 EBNA1BP2Q99848 306 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 NEXMIFQ5QGS0 1516 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CNTRLQ7Z7A1 2325 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 VGLL3A8MV65 326 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 OGTO15294 1046 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 GSC2O15499 205 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 LRPAP1P30533 357 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CRATP43155 626 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 MPP3Q13368 585 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 WDR93Q6P2C0 686 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 PGBD2Q6P3X8 592 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 PTF1AQ7RTS3 328 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ERP44Q9BS26 406 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TMEM121BQ9BXQ6 578 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 MEMO1Q9Y316 297 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SNX13Q9Y5W8 968 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 GMEB1Q9Y692 573 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 MAGEA13PA6NCF6 341 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ARL5CA6NH57 179 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ALOX12P18054 663 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 R3HDM1Q15032 1099 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 FAM91A1Q658Y4 838 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SMIM5Q71RC9 77 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 PARGQ86W56 976 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TMEM192Q8IY95 271 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 FAM98AQ8NCA5 519 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 RNF208Q9H0X6 261 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CCDC86Q9H6F5 360 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CLIC5Q9NZA1 410 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 LIMD1Q9UGP4 676 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 DMGDHQ9UI17 866 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TEX13CA0A0J9YWL9 993 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 H0YGN5 161 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 DCLK1O15075 740 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 FGF10O15520 208 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CHST10O43529 356 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SCN2BO60939 215 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 VIL1P09327 827 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TGFB3P10600 412 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 VEGFAP15692 232 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ZNF3P17036 446 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ATP5C1P36542 298 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ABL2P42684 1182 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CD151P48509 253 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SRP54P61011 504 aaKnown RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ERVK-9P63128 1117 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ZCWPW2Q504Y3 356 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ZDHHC20Q5W0Z9 365 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SYCE2Q6PIF2 218 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CHST15Q7LFX5 561 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-203ENST00000375437 NUP54Q7Z3B4 507 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 PACS2Q86VP3 889 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SCUBE1Q8IWY4 988 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 TNS4Q8IZW8 715 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CDYL2Q8N8U2 506 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 MIEF2Q96C03 454 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 SHDQ96IW2 340 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CPNE1Q99829 537 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 HGH1Q9BTY7 390 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ERVK-11Q9UQG0 969 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 ACOT9Q9Y305 439 aa5.5□□□□□ -1.53
SCN2A-203ENST00000375437 CASTOR2A6NHX0 329 aa5.49□□□□□ -1.53
SCN2A-203ENST00000375437 O00370 1275 aa5.49□□□□□ -1.53
SCN2A-203ENST00000375437 TTPAP49638 278 aa5.49□□□□□ -1.53
SCN2A-203ENST00000375437 PCBP1Q15365 356 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCN2A-203ENST00000375437 GXYLT1Q4G148 440 aa5.49□□□□□ -1.53
SCN2A-203ENST00000375437 CHSY3Q70JA7 882 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms