RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 POLR1EQ9GZS1 481 aaKnown RBP17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 NT5MQ9NPB1 228 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 ARGLU1Q9NWB6 273 aaPredicted RBP17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 MTRF1LQ9UGC7 380 aaKnown RBP17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 MUC22E2RYF6 1773 aaPredicted RBP17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 TCRBV7S3A2A0A539 114 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 MUSKO15146 869 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 NEBLO76041 1014 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 AP2A1O95782 977 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 CR2P20023 1033 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 GJA4P35212 333 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 OPRD1P41143 372 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 CYTH1Q15438 398 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 GRAMD4Q6IC98 578 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 NAT16Q8N8M0 369 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 ARRDC2Q8TBH0 407 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 OXNAD1Q96HP4 312 aaPredicted RBP17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 TSPYL1Q9H0U9 437 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 LHX3Q9UBR4 397 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 FAM50BQ9Y247 325 aa17.5■□□□□ 0.39
HLA-DMA-201ENST00000374843 MYOFQ9NZM1 2061 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 GOLGA6CA6NDK9 693 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 GOLGA6BA6NDN3 693 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 PPFIA2O75334 1257 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 ANXA9O76027 345 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 ASLP04424 464 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 APRTP07741 180 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 GOLGA6DP0CG33 693 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 SP100P23497 879 aaPredicted RBP17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 MAGEA3P43357 314 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 PRPSAP1Q14558 356 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 EIF4HQ15056 248 aaKnown RBP17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 GEN1Q17RS7 908 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 RALGPS1Q5JS13 557 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 TMEM215Q68D42 235 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 MBLAC2Q68D91 279 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 PTCRAQ6ISU1 281 aaPredicted RBP17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 LINGO4Q6UY18 593 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 PPP1R21Q6ZMI0 780 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 LEKR1Q6ZMV7 388 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 CEP128Q6ZU80 1094 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 ZNF534Q76KX8 674 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 TAB3Q8N5C8 712 aaPredicted RBP17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 PPM1EQ8WY54 764 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 DNASE1L2Q92874 299 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 ISG20Q96AZ6 181 aaKnown RBP17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 TXLNGYQ9BZA5 131 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 CEP44Q9C0F1 390 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 BRD9Q9H8M2 597 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 VPS45Q9NRW7 570 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 GOLGA6AQ9NYA3 693 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 GTSE1Q9NYZ3 720 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 DEC1Q9P2X7 70 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 AAR2Q9Y312 384 aaKnown RBP17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 ACTL7AQ9Y615 435 aa17.49■□□□□ 0.39
HLA-DMA-201ENST00000374843 E7EVH7 732 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 TRIM24O15164 1050 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 PSMD3O43242 534 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 MT-CO1P00395 513 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 MMP2P08253 660 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 FAM153BP0C7A2 387 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 CES1P23141 567 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 GEMP55040 296 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 ECT2LQ008S8 904 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 NSUN2Q08J23 767 aaKnown RBP eCLIP17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 NIPAL4Q0D2K0 466 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 MPP3Q13368 585 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 AAK1Q2M2I8 961 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 FAM153CQ494X1 144 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 BEND6Q5SZJ8 279 aaPredicted RBP17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 KDELC1Q6UW63 502 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 PRPF39Q86UA1 669 aaKnown RBP17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 RELL1Q8IUW5 271 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 SH2D3CQ8N5H7 860 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 TERB1Q8NA31 727 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 TSEN2Q8NCE0 465 aaKnown RBP17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 LRRC40Q9H9A6 602 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 KCNK12Q9HB15 430 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 XAB2Q9HCS7 855 aaKnown RBP17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 FAM153AQ9UHL3 310 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 SLC25A13Q9UJS0 675 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 TTLL3Q9Y4R7 772 aa17.48■□□□□ 0.39
HLA-DMA-201ENST00000374843 E7ESA3 106 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 EIF3HO15372 352 aaKnown RBP eCLIP17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 MLNP12872 115 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 SRCP12931 536 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 POLR2EP19388 210 aaKnown RBP17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 ADRA1AP35348 466 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 CTSOP43234 321 aaPredicted RBP17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 RGRP47804 291 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 SLC6A11P48066 632 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 NUMBP49757 651 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 MAXP61244 160 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 SKOR1P84550 965 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 DSC2Q02487 901 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 HIF1AQ16665 826 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 PREPLQ4J6C6 727 aaPredicted RBP17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 TMC3Q7Z5M5 1100 aa17.47■□□□□ 0.39
HLA-DMA-201ENST00000374843 SUGP1Q8IWZ8 645 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms