RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 SEMA3BQ13214 749 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 MAPRE1Q15691 268 aaKnown RBP17.19■□□□□ 0.34
PHF1-202ENST00000374516 GRAMD1BQ3KR37 738 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 PDPK2PQ6A1A2 396 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 FRMD7Q6ZUT3 714 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 LRRC8DQ7L1W4 858 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 NPWQ8N729 165 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 URGCPQ8TCY9 931 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 DQX1Q8TE96 717 aaKnown RBP17.19■□□□□ 0.34
PHF1-202ENST00000374516 PPP4R1Q8TF05 950 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 PGAP3Q96FM1 320 aaPredicted RBP17.19■□□□□ 0.34
PHF1-202ENST00000374516 MPP4Q96JB8 637 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 B3GALT6Q96L58 329 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 SPATA13Q96N96 652 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 FAM193BQ96PV7 902 aaPredicted RBP17.19■□□□□ 0.34
PHF1-202ENST00000374516 GCNAQ96QF7 691 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 SORT1Q99523 831 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 CFHR5Q9BXR6 569 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 PCDHB8Q9UN66 801 aa17.19■□□□□ 0.34
PHF1-202ENST00000374516 SF3B1O75533 1304 aaKnown RBP eCLIP17.18■□□□□ 0.342e-11■■■■■ 44.6
PHF1-202ENST00000374516 HACD1B0YJ81 288 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 ZNF195O14628 629 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 INPPL1O15357 1258 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 PLIN3O60664 434 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 NBNO60934 754 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 ALDOAP04075 364 aaKnown RBP17.18■□□□□ 0.34
PHF1-202ENST00000374516 SERPINE1P05121 402 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 NCF2P19878 526 aaPredicted RBP17.18■□□□□ 0.34
PHF1-202ENST00000374516 TYMPP19971 482 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 CXCR3P49682 368 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 GATMP50440 423 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 SCAPQ12770 1279 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 TBL3Q12788 808 aaKnown RBP17.18■□□□□ 0.34
PHF1-202ENST00000374516 PEX6Q13608 980 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 PAFAH1B3Q15102 231 aaKnown RBP17.18■□□□□ 0.34
PHF1-202ENST00000374516 PDK1Q15118 436 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 TLR1Q15399 786 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 OGFRL1Q5TC84 451 aaPredicted RBP17.18■□□□□ 0.34
PHF1-202ENST00000374516 VWA5B1Q5TIE3 1220 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 CYS1Q717R9 158 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 TMC7Q7Z402 723 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 DBF4BQ8NFT6 615 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 ACMSDQ8TDX5 336 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 PRICKLE1Q96MT3 831 aaPredicted RBP17.18■□□□□ 0.34
PHF1-202ENST00000374516 PGLYRP2Q96PD5 576 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 FAM96AQ9H5X1 160 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 HCSTQ9UBK5 93 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 SFMBT1Q9UHJ3 866 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 C15orf38-AP3S2A0A0A6YYH1 394 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 CAPN8A6NHC0 703 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 DENRO43583 198 aaKnown RBP17.18■□□□□ 0.34
PHF1-202ENST00000374516 TADA2AO75478 443 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 F9P00740 461 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 SMIM18P0DKX4 95 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 SRGAP2BP0DMP2 458 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 FDFT1P37268 417 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 PDE1CQ14123 709 aaPredicted RBP17.18■□□□□ 0.34
PHF1-202ENST00000374516 GPNMBQ14956 572 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 C4orf22Q6V702 233 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 ARPINQ7Z6K5 226 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 C10orf107Q8IVU9 208 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 PHTF2Q8N3S3 785 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 IRGQQ8WZA9 623 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 ITFG2Q969R8 447 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 SIK2Q9H0K1 926 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 DCDC2Q9UHG0 476 aa17.18■□□□□ 0.34
PHF1-202ENST00000374516 VILLO15195 856 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 GLRA3O75311 464 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 TFAP2AP05549 437 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 ALOX15P16050 662 aaPredicted RBP17.17■□□□□ 0.34
PHF1-202ENST00000374516 GRK2P25098 689 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 ARRB2P32121 409 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 RPL5P46777 297 aaKnown RBP17.17■□□□□ 0.34
PHF1-202ENST00000374516 ALDH1A3P47895 512 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 VEGFBP49765 207 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 AIF1P55008 147 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 MTTPP55157 894 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 CRADDP78560 199 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 SEMA5AQ13591 1074 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 PCLAFQ15004 111 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 DDR2Q16832 855 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 LCA5Q86VQ0 697 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 UNC5BQ8IZJ1 945 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 MARVELD2Q8N4S9 558 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 RRN3Q9NYV6 651 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 DTNAQ9Y4J8 743 aa17.17■□□□□ 0.34
PHF1-202ENST00000374516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.16■□□□□ 0.34
PHF1-202ENST00000374516 MSI1O43347 362 aaKnown RBP17.16■□□□□ 0.34
PHF1-202ENST00000374516 ZMPSTE24O75844 475 aa17.16■□□□□ 0.34
PHF1-202ENST00000374516 LRIG2O94898 1065 aa17.16■□□□□ 0.34
PHF1-202ENST00000374516 SELPP16109 830 aa17.16■□□□□ 0.34
PHF1-202ENST00000374516 GPR15P49685 360 aa17.16■□□□□ 0.34
PHF1-202ENST00000374516 INHBCP55103 352 aa17.16■□□□□ 0.34
PHF1-202ENST00000374516 ZNF567Q8N184 647 aa17.16■□□□□ 0.34
PHF1-202ENST00000374516 SLAIN1Q8ND83 568 aa17.16■□□□□ 0.34
PHF1-202ENST00000374516 ATP2A3Q93084 1043 aa17.16■□□□□ 0.34
PHF1-202ENST00000374516 ARHGAP26Q9UNA1 814 aa17.16■□□□□ 0.34
PHF1-202ENST00000374516 TNFRSF10BO14763 440 aa17.16■□□□□ 0.34
PHF1-202ENST00000374516 TPP1O14773 563 aa17.16■□□□□ 0.34
PHF1-202ENST00000374516 CLPTM1O96005 669 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms