RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 A0A1B0GVM2 712 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 MAGEB16A2A368 324 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 TTC24A2A3L6 582 aaPredicted RBP17.14■□□□□ 0.33
PTPN20-203ENST00000374342 HMX2A2RU54 273 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 TCAF2A6NFQ2 919 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 RFPL1O75677 317 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 RHOCP08134 193 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 SYN1P17600 705 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 CCNFP41002 786 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 SEPT6Q14141 434 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 PABPC1LQ4VXU2 614 aaKnown RBP17.14■□□□□ 0.33
PTPN20-203ENST00000374342 ZNF449Q6P9G9 518 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 CCDC149Q6ZUS6 474 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 SH2D5Q6ZV89 423 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 CHST9Q7L1S5 443 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 KCNMB4Q86W47 210 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 SLC25A41Q8N5S1 370 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 RAD9AQ99638 391 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 DDX50Q9BQ39 737 aaKnown RBP17.14■□□□□ 0.33
PTPN20-203ENST00000374342 IQCGQ9H095 443 aaKnown RBP17.14■□□□□ 0.33
PTPN20-203ENST00000374342 C20orf96Q9NUD7 363 aaPredicted RBP17.14■□□□□ 0.33
PTPN20-203ENST00000374342 CPQQ9Y646 472 aa17.14■□□□□ 0.33
PTPN20-203ENST00000374342 MMP2P08253 660 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 TAC1P20366 129 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 FRG1Q14331 258 aaKnown RBP17.13■□□□□ 0.33
PTPN20-203ENST00000374342 PCID2Q5JVF3 399 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 KREMEN2Q8NCW0 462 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 SP7Q8TDD2 431 aaPredicted RBP17.13■□□□□ 0.33
PTPN20-203ENST00000374342 MRPS31Q92665 395 aaKnown RBP17.13■□□□□ 0.33
PTPN20-203ENST00000374342 ZNF778Q96MU6 729 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 FAM111AQ96PZ2 611 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 CPNE1Q99829 537 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 SPON2Q9BUD6 331 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 KIFC1Q9BW19 673 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 GBF1Q92538 1859 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.13■□□□□ 0.33
PTPN20-203ENST00000374342 OLFM2O95897 454 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 F7P08709 466 aaPredicted RBP17.13■□□□□ 0.33
PTPN20-203ENST00000374342 ALADP13716 330 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 HDCP19113 662 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 GP5P40197 560 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 OXCT1P55809 520 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 ERVFC1P60507 584 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 TNK2Q07912 1038 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 ZNF177Q13360 481 aaPredicted RBP17.13■□□□□ 0.33
PTPN20-203ENST00000374342 PDK4Q16654 411 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 HSP90AA5PQ58FG0 334 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 GAREM2Q75VX8 874 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 TMC8Q8IU68 726 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 ELMOD1Q8N336 334 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 SPOCK2Q92563 424 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 SRPK1Q96SB4 655 aaKnown RBP17.13■□□□□ 0.33
PTPN20-203ENST00000374342 ELAC2Q9BQ52 826 aaKnown RBP17.13■□□□□ 0.33
PTPN20-203ENST00000374342 EMILIN2Q9BXX0 1053 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 POLR1EQ9GZS1 481 aaKnown RBP17.13■□□□□ 0.33
PTPN20-203ENST00000374342 RETREG1Q9H6L5 497 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 TCAF1Q9Y4C2 921 aa17.13■□□□□ 0.33
PTPN20-203ENST00000374342 HIDE1A8MVS5 230 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 GJB3O75712 270 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 GLUD1P00367 558 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 CKMP06732 381 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 ITGA2BP08514 1039 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 GLDCP23378 1020 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 PKN3Q6P5Z2 889 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 LILRA6Q6PI73 481 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 RANBP10Q6VN20 620 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 FAM47EQ6ZV65 393 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 MICALCLQ6ZW33 695 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 MAB21L3Q8N8X9 362 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 ARRDC2Q8TBH0 407 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 LRRC8CQ8TDW0 803 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 ADAMTS19Q8TE59 1207 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 ZNF599Q96NL3 588 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 GCNAQ96QF7 691 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 AGAP2Q99490 1192 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 SEMA3CQ99985 751 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 SLC13A1Q9BZW2 595 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 MCOLN1Q9GZU1 580 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 ATP13A1Q9HD20 1204 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 VPS45Q9NRW7 570 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 IARS2Q9NSE4 1012 aaKnown RBP17.12■□□□□ 0.33
PTPN20-203ENST00000374342 ACTL7AQ9Y615 435 aa17.12■□□□□ 0.33
PTPN20-203ENST00000374342 WDR91A4D1P6 747 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 GOLGA8TH3BQL2 631 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 TPP1O14773 563 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 MUSKO15146 869 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 CCL16O15467 120 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 LATS1O95835 1130 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 MYL4P12829 197 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 DNAJC3Q13217 504 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 POTEHQ6S545 545 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 STRA8Q7Z7C7 330 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 CCDC197Q8NCU1 140 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 HERVK_113Q902F9 699 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 ATXN7L3BQ96GX2 97 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 RBBP8Q99708 897 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 MUC3BQ9H195 1237 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 UBA2Q9UBT2 640 aaPredicted RBP17.11■□□□□ 0.33
PTPN20-203ENST00000374342 ANKRD36A6QL64 1941 aa17.11■□□□□ 0.33
PTPN20-203ENST00000374342 ILVBLA1L0T0 632 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms