RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TCAF1Q9Y4C2 921 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 PTPRDP23468 1912 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 PLXNA3P51805 1871 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 FRMPD3Q5JV73 1810 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 ABHD14A-ACY1A0A1B0GW23 586 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 A0A1W2PQH9 124 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 ILVBLA1L0T0 632 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 HMX2A2RU54 273 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 MTMR11A4FU01 709 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 F5H5T6 163 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 DFFAO00273 331 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 TRIM13O60858 407 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 EFEMP2O95967 443 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 FGF1P05230 155 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 GALTP07902 379 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 RBP1P09455 135 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 RALBP11234 206 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 CPB1P15086 417 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 CPA3P15088 417 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 PCSK2P16519 638 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 STMN1P16949 149 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 CD9P21926 228 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 YY1P25490 414 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 PSMA3P25788 255 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 PPM1AP35813 382 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 LEPRP48357 1165 aaKnown RBP8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 SERPINH1P50454 418 aaKnown RBP8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 CLCN5P51795 746 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC12A2P55011 1212 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 ELF3P78545 371 aaPredicted RBP8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 KCNC4Q03721 635 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 TRIM32Q13049 653 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 ZBTB17Q13105 803 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 PDE1CQ14123 709 aaPredicted RBP8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 IKBKEQ14164 716 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 VEPH1Q14D04 833 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 EFTUD2Q15029 972 aaKnown RBP eCLIP8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 FAM83EQ2M2I3 478 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 FASTKD1Q53R41 847 aaKnown RBP8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 MS4A13Q5J8X5 152 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 C6orf163Q5TEZ5 329 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 FSTL4Q6MZW2 842 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 TRMT10BQ6PF06 316 aaKnown RBP8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 ITIH5Q86UX2 942 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 LAPTM4BQ86VI4 370 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 ZNF280BQ86YH2 543 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC22A9Q8IVM8 553 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 HERC6Q8IVU3 1022 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 MPP5Q8N3R9 675 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 CNTD1Q8N815 330 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 ANKLE1Q8NAG6 615 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 ARMC2Q8NEN0 867 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 DBF4BQ8NFT6 615 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 GPR150Q8NGU9 434 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 OR6Y1Q8NGX8 325 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 SCAMP5Q8TAC9 235 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 ADAM32Q8TC27 787 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 CD99L2Q8TCZ2 262 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 NDRG1Q92597 394 aaKnown RBP8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 PTPRN2Q92932 1015 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 SKA1Q96BD8 255 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 ERP27Q96DN0 273 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 CMTM5Q96DZ9 223 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 MRRFQ96E11 262 aaKnown RBP8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 FEM1CQ96JP0 617 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 BTBD10Q9BSF8 475 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 MLPHQ9BV36 600 aaPredicted RBP8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC13A1Q9BZW2 595 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC39A8Q9C0K1 460 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 SIK2Q9H0K1 926 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 MYLK2Q9H1R3 596 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 SP110Q9HB58 689 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 NMRAL1Q9HBL8 299 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 MLXIPLQ9NP71 852 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 NPHS2Q9NP85 383 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 PAK6Q9NQU5 681 aaPredicted RBP8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 RNF19AQ9NV58 838 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 DNAJB4Q9UDY4 337 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 BCAP29Q9UHQ4 241 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 ZMYM5Q9UJ78 669 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 HAO1Q9UJM8 370 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 STOML2Q9UJZ1 356 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 TMCO1Q9UM00 188 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 PCDHGA10Q9Y5H3 936 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 COMMD10Q9Y6G5 202 aa8.84□□□□□ -0.99
SNRNP40-202ENST00000373720 LOC285095A0A1B0GVY8 99 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 TYW5A2RUC4 315 aaKnown RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 F8W8V4 182 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 I6L893 689 aaPredicted RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 GOLGA8RI6L899 631 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 TPP1O14773 563 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 MAGEC1O60732 1142 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 CRTAMO95727 393 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 PROCP04070 461 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 ESRRAP11474 423 aaPredicted RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 AOC1P19801 751 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 COL9A1P20849 921 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 MAPK8P45983 427 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 CD151P48509 253 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 SLC1A6P48664 564 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms