RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 RTN4RL1Q86UN2 441 aaPredicted RBP29.33■■■□□ 2.29
SSBP3-204ENST00000371320 LCA5Q86VQ0 697 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 NUP93Q8N1F7 819 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 POU5F2Q8N7G0 328 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 TDRD5Q8NAT2 981 aaKnown RBP29.33■■■□□ 2.29
SSBP3-204ENST00000371320 DTX3LQ8TDB6 740 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 SCYL1Q96KG9 808 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 MRM3Q9HC36 420 aaKnown RBP29.33■■■□□ 2.29
SSBP3-204ENST00000371320 STX18Q9P2W9 335 aaKnown RBP29.33■■■□□ 2.29
SSBP3-204ENST00000371320 RUVBL2Q9Y230 463 aaKnown RBP29.33■■■□□ 2.29
SSBP3-204ENST00000371320 TK2O00142 265 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 EOMESO95936 686 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 SLC35E2BP0CK96 405 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 VHLP40337 213 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 OR1G1P47890 313 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 TM4SF4P48230 202 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 PGGT1BP53609 377 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 COPAP53621 1224 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 MPP1Q00013 466 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 PIK3R6Q5UE93 754 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 MRGPRX2Q96LB1 330 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 SLC2A6Q9UGQ3 507 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 SLC7A8Q9UHI5 535 aa29.33■■■□□ 2.29
SSBP3-204ENST00000371320 WASH4PA8MWX3 477 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 TBX10O75333 385 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 DSC1Q08554 894 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 TSNAXIP1Q2TAA8 658 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 RANBP10Q6VN20 620 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 KCTD4Q8WVF5 259 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 FTHL17Q9BXU8 183 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 ILKAPQ9H0C8 392 aaPredicted RBP29.32■■■□□ 2.28
SSBP3-204ENST00000371320 ATXN3LQ9H3M9 355 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 BATF3Q9NR55 127 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 SLC2A3P11169 496 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 PAMP19021 973 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 ARNTP27540 789 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 POLD2P49005 469 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 GPR15P49685 360 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 CNGA3Q16281 694 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 NOMO2Q5JPE7 1267 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 CLLU1OSQ5K130 101 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 SNX30Q5VWJ9 437 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 LIPMQ5VYY2 423 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 RIPOR1Q6ZS17 1223 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 SLC24A5Q71RS6 500 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 TMEM151AQ8N4L1 468 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 CMTM5Q96DZ9 223 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 UBE2OQ9C0C9 1292 aaKnown RBP29.32■■■□□ 2.28
SSBP3-204ENST00000371320 TRPV6Q9H1D0 765 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 FBXO44Q9H4M3 255 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 TBC1D13Q9NVG8 400 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 FNIP2Q9P278 1114 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 ACOT9Q9Y305 439 aa29.32■■■□□ 2.28
SSBP3-204ENST00000371320 CABYRO75952 493 aa29.31■■■□□ 2.28
SSBP3-204ENST00000371320 LUC7L3O95232 432 aaKnown RBP29.31■■■□□ 2.28
SSBP3-204ENST00000371320 COL6A2P12110 1019 aa29.31■■■□□ 2.28
SSBP3-204ENST00000371320 ELNP15502 786 aa29.31■■■□□ 2.28
SSBP3-204ENST00000371320 GLRBP48167 497 aa29.31■■■□□ 2.28
SSBP3-204ENST00000371320 SLC25A3Q00325 362 aa29.31■■■□□ 2.28
SSBP3-204ENST00000371320 SEPT6Q14141 434 aa29.31■■■□□ 2.28
SSBP3-204ENST00000371320 NFE2Q16621 373 aaPredicted RBP29.31■■■□□ 2.28
SSBP3-204ENST00000371320 MUM1Q2TAK8 710 aa29.31■■■□□ 2.28
SSBP3-204ENST00000371320 AGR3Q8TD06 166 aa29.31■■■□□ 2.28
SSBP3-204ENST00000371320 DNAJC9Q8WXX5 260 aa29.31■■■□□ 2.28
SSBP3-204ENST00000371320 SLC39A13Q96H72 371 aa29.31■■■□□ 2.28
SSBP3-204ENST00000371320 FUBP3Q96I24 572 aaKnown RBP eCLIP29.31■■■□□ 2.28
SSBP3-204ENST00000371320 PANX3Q96QZ0 392 aa29.31■■■□□ 2.28
SSBP3-204ENST00000371320 PRG3Q9Y2Y8 225 aaPredicted RBP29.31■■■□□ 2.28
SSBP3-204ENST00000371320 NVLO15381 856 aaKnown RBP29.3■■■□□ 2.28
SSBP3-204ENST00000371320 PRKAA2P54646 552 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 TBX4P57082 545 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 RAB10P61026 200 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 SLC9B1Q4ZJI4 515 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 FSCBQ5H9T9 825 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 TRIM68Q6AZZ1 485 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 MSANTD2Q6P1R3 559 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 COLGALT2Q8IYK4 626 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 C8orf48Q96LL4 319 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 NOL6Q9H6R4 1146 aaKnown RBP29.3■■■□□ 2.28
SSBP3-204ENST00000371320 MAN1C1Q9NR34 630 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 FAM95CA0A1B0GW59 222 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 SBK3P0C264 359 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 CKBP12277 381 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 ATP6V1C1P21283 382 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 DNAJB1P25685 340 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 GRK4P32298 578 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 CHRNA4P43681 627 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 GRIA4P48058 902 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 WNT3AP56704 352 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 PCSK7Q16549 785 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 C1orf146Q5VVC0 180 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 CENPLQ8N0S6 344 aaPredicted RBP29.3■■■□□ 2.28
SSBP3-204ENST00000371320 ARHGAP18Q8N392 663 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 DRC3Q9H069 523 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 TREX1Q9NSU2 369 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 NMRK1Q9NWW6 199 aa29.3■■■□□ 2.28
SSBP3-204ENST00000371320 TMEM189-UBE2V1I3L0A0 370 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 STMN1P16949 149 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 SLC1A2P43004 574 aa29.29■■■□□ 2.28
SSBP3-204ENST00000371320 ACTR3P61158 418 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms