RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 ETNPPLQ8TBG4 499 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 SNX19Q92543 992 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 DPF3Q92784 378 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 RACGAP1Q9H0H5 632 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 ZDHHC18Q9NUE0 388 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 CDH9Q9ULB4 789 aa10.55□□□□□ -0.72
PRDM1-201ENST00000369089 METTL21EPA6NDL7 271 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 ZNF879B4DU55 563 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 BTN3A1O00481 513 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 KPNA3O00505 521 aaPredicted RBP10.54□□□□□ -0.72
PRDM1-201ENST00000369089 MRASO14807 208 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 CYP1A2P05177 515 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 IL6P05231 212 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 MMP8P22894 467 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 RRM1P23921 792 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SLC15A1P46059 708 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SNAP25P60880 206 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 FAAP100Q0VG06 881 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 GALNT1Q10472 559 aaPredicted RBP10.54□□□□□ -0.72
PRDM1-201ENST00000369089 MAB21L1Q13394 359 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 AGKQ53H12 422 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 GLRA4Q5JXX5 417 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 USP43Q70EL4 1123 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 PIAS4Q8N2W9 510 aaPredicted RBP10.54□□□□□ -0.72
PRDM1-201ENST00000369089 DNAJC18Q9H819 358 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 KCNMB3Q9NPA1 279 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 CCNB1IP1Q9NPC3 277 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 MAN1C1Q9NR34 630 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 TCEA3O75764 348 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 PTTG1O95997 202 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 CNTFP26441 200 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 NUP62P37198 522 aaPredicted RBP10.54□□□□□ -0.72
PRDM1-201ENST00000369089 STARP49675 285 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 MTM1Q13496 603 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 MOGSQ13724 837 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 GRM2Q14416 872 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SKIV2LQ15477 1246 aaKnown RBP10.54□□□□□ -0.72
PRDM1-201ENST00000369089 PPP1R2P1Q96PQ5 205 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 APOL5Q9BWW9 433 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SYTL2Q9HCH5 934 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SH3GLB2Q9NR46 395 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 FAM49BQ9NUQ9 324 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SLC17A7Q9P2U7 560 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 AP4E1Q9UPM8 1137 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 NUMBLQ9Y6R0 609 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 H3BMM5 538 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 AVILO75366 819 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 TIPRLO75663 272 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 VAPBO95292 243 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 DHFRP00374 187 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 GLDCP23378 1020 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SSTR1P30872 391 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 GPR85P60893 370 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 POU5F1BQ06416 359 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 IMPG1Q17R60 797 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 RC3H1Q5TC82 1133 aaKnown RBP10.54□□□□□ -0.72
PRDM1-201ENST00000369089 FAXCQ5TGI0 409 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 PCDH20Q8N6Y1 951 aaKnown RBP10.54□□□□□ -0.72
PRDM1-201ENST00000369089 ANKK1Q8NFD2 765 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 RCN3Q96D15 328 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 IFT43Q96FT9 208 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SEPHS2Q99611 448 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 TMEM47Q9BQJ4 181 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 NEURL2Q9BR09 285 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SLC22A4Q9H015 551 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 ZNF408Q9H9D4 720 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 APEX2Q9UBZ4 518 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 IPO11Q9UI26 975 aaKnown RBP10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SALL4Q9UJQ4 1053 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 ANAPC2Q9UJX6 822 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 MAPRE3Q9UPY8 281 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 CFL2Q9Y281 166 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 GPSM3Q9Y4H4 160 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 MYO1GB0I1T2 1018 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 hCG_1984214I3L0E3 225 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SLC16A3O15427 465 aaKnown RBP10.54□□□□□ -0.72
PRDM1-201ENST00000369089 BMP3P12645 472 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 TNNI3P19429 210 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 ITGA1P56199 1179 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 S100A12P80511 92 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 OGFRL1Q5TC84 451 aaPredicted RBP10.54□□□□□ -0.72
PRDM1-201ENST00000369089 PAOXQ6QHF9 649 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.54□□□□□ -0.72
PRDM1-201ENST00000369089 CLYBLQ8N0X4 340 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 SLC5A5Q92911 643 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 TMIGD2Q96BF3 282 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 C17orf62Q9BQA9 187 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 MROQ9BYG7 248 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 HSPBP1Q9NZL4 362 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 HSFX1Q9UBD0 423 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 MAD2L2Q9UI95 211 aa10.54□□□□□ -0.72
PRDM1-201ENST00000369089 DHRS12A0PJE2 317 aa10.53□□□□□ -0.72
PRDM1-201ENST00000369089 NPR2P20594 1047 aa10.53□□□□□ -0.72
PRDM1-201ENST00000369089 IMPDH1P20839 514 aa10.53□□□□□ -0.72
PRDM1-201ENST00000369089 GSTM2P28161 218 aa10.53□□□□□ -0.72
PRDM1-201ENST00000369089 MSX2P35548 267 aaPredicted RBP10.53□□□□□ -0.72
PRDM1-201ENST00000369089 TALDO1P37837 337 aa10.53□□□□□ -0.72
PRDM1-201ENST00000369089 HSF2Q03933 536 aa10.53□□□□□ -0.72
PRDM1-201ENST00000369089 TNK2Q07912 1038 aa10.53□□□□□ -0.72
PRDM1-201ENST00000369089 DLG2Q15700 870 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms