RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 MOCS2O96007 188 aaPredicted RBP14.22□□□□□ -0.13
USF1-202ENST00000368020 LMNAP02545 664 aaKnown RBP14.22□□□□□ -0.13
USF1-202ENST00000368020 SERPINA6P08185 405 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 FGF3P11487 239 aaPredicted RBP14.22□□□□□ -0.13
USF1-202ENST00000368020 CPA3P15088 417 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 ADRA1AP35348 466 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 SLC1A6P48664 564 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 PAPOLAP51003 745 aaKnown RBP14.22□□□□□ -0.13
USF1-202ENST00000368020 KPNA2P52292 529 aaKnown RBP14.22□□□□□ -0.13
USF1-202ENST00000368020 GPR17Q13304 367 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 LAMB3Q13751 1172 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 WASHC2DQ5SRD0 308 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 CES3Q6UWW8 571 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 KIAA0408Q6ZU52 694 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 ANKS3Q6ZW76 656 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 CLEC14AQ86T13 490 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 CALML6Q8TD86 181 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 HERVK_113Q902F9 699 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 PTCD3Q96EY7 689 aaKnown RBP14.22□□□□□ -0.13
USF1-202ENST00000368020 BTBD10Q9BSF8 475 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 TBC1D10AQ9BXI6 508 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 ARNT2Q9HBZ2 717 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 CHRAC1Q9NRG0 131 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 OSER1Q9NX31 292 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 TLK1Q9UKI8 766 aa14.22□□□□□ -0.13
USF1-202ENST00000368020 A0A096LPK6 155 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 FCHO1O14526 889 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 SNUPNO95149 360 aaKnown RBP14.21□□□□□ -0.13
USF1-202ENST00000368020 CBX6O95503 412 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 GSRP00390 522 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 RALBP11234 206 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 ESRRAP11474 423 aaPredicted RBP14.21□□□□□ -0.13
USF1-202ENST00000368020 CPB1P15086 417 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 SYN1P17600 705 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 ASPHQ12797 758 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 DDR2Q16832 855 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 PARP15Q460N3 678 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 PIK3R6Q5UE93 754 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 KIAA0930Q6ICG6 404 aaPredicted RBP14.21□□□□□ -0.13
USF1-202ENST00000368020 OTOP3Q7RTS5 596 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 OTOP2Q7RTS6 562 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 IPMKQ8NFU5 416 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 USP33Q8TEY7 942 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 RANBP9Q96S59 729 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 IARS2Q9NSE4 1012 aaKnown RBP14.21□□□□□ -0.13
USF1-202ENST00000368020 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.21□□□□□ -0.13
USF1-202ENST00000368020 GMIPQ9P107 970 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 SLC17A6Q9P2U8 582 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 DNAJB4Q9UDY4 337 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 TCAF1Q9Y4C2 921 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 CDY1Q9Y6F8 540 aa14.21□□□□□ -0.13
USF1-202ENST00000368020 HEATR9A2RTY3 570 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 CARNS1A5YM72 827 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 HLA-DQB2P05538 268 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 NMBRP28336 390 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 MAPKAPK2P49137 400 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 HARS2P49590 506 aaKnown RBP14.21□□□□□ -0.14
USF1-202ENST00000368020 AQP5P55064 265 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 YBEYP58557 167 aaPredicted RBP14.21□□□□□ -0.14
USF1-202ENST00000368020 OLIG2Q13516 323 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 SLC12A1Q13621 1099 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 MS4A13Q5J8X5 152 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 RANBP10Q6VN20 620 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 ZC3HC1Q86WB0 502 aaKnown RBP14.21□□□□□ -0.14
USF1-202ENST00000368020 CEP57Q86XR8 500 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 LMNTD2Q8IXW0 634 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 ZNF683Q8IZ20 524 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 LRRC43Q8N309 656 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 PHOSPHO2Q8TCD6 241 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 ZNF689Q96CS4 500 aaPredicted RBP14.21□□□□□ -0.14
USF1-202ENST00000368020 AGAP2Q99490 1192 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 APOL2Q9BQE5 337 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 FICDQ9BVA6 458 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 MTIF3Q9H2K0 278 aaKnown RBP14.21□□□□□ -0.14
USF1-202ENST00000368020 SP110Q9HB58 689 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 DNAJC28Q9NX36 388 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 UBP1Q9NZI7 540 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 MARCH2Q9P0N8 246 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 TRIM33Q9UPN9 1127 aa14.21□□□□□ -0.14
USF1-202ENST00000368020 GYG2O15488 501 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 IGLV3-27P01718 113 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 ALOX15P16050 662 aaPredicted RBP14.2□□□□□ -0.14
USF1-202ENST00000368020 CRABP2P29373 138 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 ABCE1P61221 599 aaKnown RBP14.2□□□□□ -0.14
USF1-202ENST00000368020 DEFB103AP81534 67 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 EFEMP1Q12805 493 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 THOC5Q13769 683 aaKnown RBP14.2□□□□□ -0.14
USF1-202ENST00000368020 TSNAXIP1Q2TAA8 658 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 ARTNQ5T4W7 220 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 WLSQ5T9L3 541 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 MARC1Q5VT66 337 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 FUT10Q6P4F1 479 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 ARHGAP36Q6ZRI8 547 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 GALNT7Q86SF2 657 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 LONP2Q86WA8 852 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 C10orf107Q8IVU9 208 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 PIAS4Q8N2W9 510 aaPredicted RBP14.2□□□□□ -0.14
USF1-202ENST00000368020 SPATA22Q8NHS9 363 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 STON2Q8WXE9 905 aa14.2□□□□□ -0.14
USF1-202ENST00000368020 RILPQ96NA2 401 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms