RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SETSIPP0DME0 302 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 SRCP12931 536 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 ITGB7P26010 798 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 ELAVL4P26378 380 aaKnown RBP14.97□□□□□ -0.01
VAMP4-202ENST00000367740 COL8A1P27658 744 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 DCTP40126 519 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 RGS7P49802 495 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 ATP1A2P50993 1020 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 ARSDP51689 593 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 LACTB2Q53H82 288 aaPredicted RBP14.97□□□□□ -0.01
VAMP4-202ENST00000367740 CEP135Q66GS9 1140 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 FAM173BQ6P4H8 233 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 TMPRSS9Q7Z410 1059 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 CHST14Q8NCH0 376 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 CCDC150Q8NCX0 1101 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 PCDH19Q8TAB3 1148 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 GRIN3AQ8TCU5 1115 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 RNF34Q969K3 372 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 DHX58Q96C10 678 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 CATSPER2Q96P56 530 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 LENG8Q96PV6 779 aaPredicted RBP14.97□□□□□ -0.01
VAMP4-202ENST00000367740 CMKLR1Q99788 373 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 EPAS1Q99814 870 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 B3GNT4Q9C0J1 378 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 BLZF1Q9H2G9 400 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 KCTD10Q9H3F6 313 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 MMRN2Q9H8L6 949 aa14.97□□□□□ -0.01
VAMP4-202ENST00000367740 MORC2Q9Y6X9 1032 aaPredicted RBP14.97□□□□□ -0.01
VAMP4-202ENST00000367740 VPS37CA5D8V6 355 aaPredicted RBP14.96□□□□□ -0.01
VAMP4-202ENST00000367740 PRR19A6NJB7 356 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 F5H5T6 163 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 SEMA7AO75326 666 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 PRNPP04156 253 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 GNLYP22749 145 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 KLRB1Q12918 225 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 TAC4Q86UU9 113 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 CCNJLQ8IV13 435 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 SLITRK4Q8IW52 837 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 SEMA4DQ92854 862 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 FAXDC2Q96IV6 333 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 PRMT1Q99873 361 aaKnown RBP14.96□□□□□ -0.01
VAMP4-202ENST00000367740 FEM1AQ9BSK4 669 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 SLC13A1Q9BZW2 595 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 ZNF768Q9H5H4 540 aaKnown RBP14.96□□□□□ -0.01
VAMP4-202ENST00000367740 SMC3Q9UQE7 1217 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 HS3ST2Q9Y278 367 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 OR51B4Q9Y5P0 310 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 FADS3Q9Y5Q0 445 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 RNF215Q9Y6U7 377 aa14.96□□□□□ -0.01
VAMP4-202ENST00000367740 SETD2Q9BYW2 2564 aaPredicted RBP14.96□□□□□ -0.01
VAMP4-202ENST00000367740 O00370 1275 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 MT-CO1P00395 513 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 APOEP02649 317 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 ADRB3P13945 408 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 NEK3P51956 506 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 NUCB2P80303 420 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 MMRN1Q13201 1228 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 C16orf72Q14CZ0 275 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 TTC39BQ5VTQ0 682 aaPredicted RBP14.95□□□□□ -0.02
VAMP4-202ENST00000367740 PMF1Q6P1K2 205 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 KIAA0895Q8NCT3 520 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 PMEPA1Q969W9 287 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 EEF2KMTQ96G04 330 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 FEM1CQ96JP0 617 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 BTN2A3PQ96KV6 586 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 CCDC114Q96M63 670 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 C1QTNF2Q9BXJ5 285 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 VPS28Q9UK41 221 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 FRMD4BQ9Y2L6 1034 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 NF1P21359 2839 aa14.95□□□□□ -0.02
VAMP4-202ENST00000367740 PRRC2CQ9Y520 2896 aaKnown RBP14.95□□□□□ -0.02
VAMP4-202ENST00000367740 CSMD2Q7Z408 3487 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 ZNF891A8MT65 544 aaPredicted RBP14.94□□□□□ -0.02
VAMP4-202ENST00000367740 K7ERQ8 282 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 EIF5BO60841 1220 aaKnown RBP14.94□□□□□ -0.02
VAMP4-202ENST00000367740 PRKCGP05129 697 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 CCL4P13236 92 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 CD19P15391 556 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 NR1D1P20393 614 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 IRAK1P51617 712 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 THOP1P52888 689 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 CENPCQ03188 943 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 PTK2BQ14289 1009 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 SLC39A14Q15043 492 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 TCEA2Q15560 299 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 ZC3H12AQ5D1E8 599 aaKnown RBP14.94□□□□□ -0.02
VAMP4-202ENST00000367740 ARSIQ5FYB1 569 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 FAXCQ5TGI0 409 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 TMEM164Q5U3C3 297 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 IL22RA1Q8N6P7 574 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 Q8N9G6 341 aaPredicted RBP14.94□□□□□ -0.02
VAMP4-202ENST00000367740 DENND6BQ8NEG7 585 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 GPBAR1Q8TDU6 330 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 SLC35F5Q8WV83 523 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 PPP1R16AQ96I34 528 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 TMEM8AQ9HCN3 771 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 IL36AQ9UHA7 158 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 DOLKQ9UPQ8 538 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 TP53TG5Q9Y2B4 290 aa14.94□□□□□ -0.02
VAMP4-202ENST00000367740 CHD5Q8TDI0 1954 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms