RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SIAH1Q8IUQ4 282 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 TEPSINQ96N21 525 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 ISM1B1AKI9 464 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 E9PBE3 544 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 KLHL41O60662 606 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 STBD1O95210 358 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 PEX5P50542 639 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 FLOT2Q14254 428 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 DAB2IPQ5VWQ8 1189 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 CLEC4FQ8N1N0 589 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 TNIP2Q8NFZ5 429 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 FNIP1Q8TF40 1166 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 OR8D1Q8WZ84 308 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 BTN2A3PQ96KV6 586 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 POLG2Q9UHN1 485 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 C1orf232A0A0U1RR37 186 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 ARL5CA6NH57 179 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 EOMESO95936 686 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 GRAMD4Q6IC98 578 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 ANKRD6Q9Y2G4 727 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 PRKAB1Q9Y478 270 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 NRIP1P48552 1158 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 DHPSP49366 369 aaPredicted RBP11.73□□□□□ -0.53
SYNE1-204ENST00000367248 SLC5A3P53794 718 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 XYLT1Q86Y38 959 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 TMPRSS4Q9NRS4 437 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 KCND1Q9NSA2 647 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 XRN1Q8IZH2 1706 aaKnown RBP11.73□□□□□ -0.53
SYNE1-204ENST00000367248 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 ARVCFO00192 962 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 FGF19O95750 216 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 RPN2P04844 631 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 SERPINB5P36952 375 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 KREMEN2Q8NCW0 462 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 LRRN4CLQ8ND94 238 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 OR56A4Q8NGH8 313 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 NPLOC4Q8TAT6 608 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 IRGQQ8WZA9 623 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 CASP10Q92851 521 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 ZNF556Q9HAH1 456 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 PARVBQ9HBI1 364 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 AHSPQ9NZD4 102 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 MORF4L1Q9UBU8 362 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 ZNF510Q9Y2H8 683 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 REXO2Q9Y3B8 237 aaKnown RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 TBC1D4O60343 1298 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 CDK7P50613 346 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 PRKAA2P54646 552 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 POU5F1Q01860 360 aaKnown RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 GALNT3Q14435 633 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 FAM46CQ5VWP2 391 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 HGSNATQ68CP4 663 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 METTL6Q8TCB7 284 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 STK32AQ8WU08 396 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 CATSPERZQ9NTU4 200 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 STK39Q9UEW8 545 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 KNDC1Q76NI1 1749 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 ITGAVP06756 1048 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 TFE3P19532 575 aaPredicted RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 DGKAP23743 735 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 GTF2E2P29084 291 aaKnown RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 PIK3CGP48736 1102 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 ZFP14Q9HCL3 533 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 MON2Q7Z3U7 1717 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 TMEM114B3SHH9 223 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 ZBTB14O43829 449 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 CES1P23141 567 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 SKIV2L2P42285 1042 aaKnown RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 POLE2P56282 527 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 IL2P60568 153 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 NFYCQ13952 458 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 LRRC36Q1X8D7 754 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 LINGO4Q6UY18 593 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 DAW1Q8N136 415 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 TMEM120AQ9BXJ8 343 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 SLC31A1O15431 190 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 RASGRP1O95267 797 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 PLK1P53350 603 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 SLC4A11Q8NBS3 891 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 DNAJC1Q96KC8 554 aaKnown RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 KLHL5Q96PQ7 755 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 FERD3LQ96RJ6 166 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 ACAT2Q9BWD1 397 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 TCF7L2Q9NQB0 619 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 RCOR3Q9P2K3 495 aaPredicted RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 PCDHGC3Q9UN70 934 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 ADRA1DP25100 572 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 TKTP29401 623 aaKnown RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 ADSSP30520 456 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 CORO1AP31146 461 aaKnown RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 WNT3AP56704 352 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 CRADDP78560 199 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 IFI35P80217 286 aaPredicted RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 ABRQ12979 859 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 SPDYCQ5MJ68 293 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 VPS45Q9NRW7 570 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 IMP3Q9NV31 184 aaKnown RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 TBC1D14Q9P2M4 693 aa11.72□□□□□ -0.53
SYNE1-204ENST00000367248 WRAP73Q9P2S5 460 aaPredicted RBP11.72□□□□□ -0.53
SYNE1-204ENST00000367248 MRPS17Q9Y2R5 130 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms