RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 UROC1Q96N76 676 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 NT5C1BQ96P26 610 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 KLHL5Q96PQ7 755 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 TSPAN18Q96SJ8 248 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 MYOCQ99972 504 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 MRI1Q9BV20 369 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 KRTAP4-9Q9BYQ8 210 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 IKZF4Q9H2S9 585 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 ADAM7Q9H2U9 754 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 ZHX3Q9H4I2 956 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 WDCPQ9H6R7 721 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 MRPL17Q9NRX2 175 aaKnown RBP8.32□□□□□ -1.08
YBX3-204ENST00000366290 SLC38A7Q9NVC3 462 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 PRG3Q9Y2Y8 225 aaPredicted RBP8.32□□□□□ -1.08
YBX3-204ENST00000366290 STYXL1Q9Y6J8 313 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 MYO10Q9HD67 2058 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 ANK1P16157 1881 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 PLXNA3P51805 1871 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 DENND4AQ7Z401 1863 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 ZDBF2Q9HCK1 2354 aa8.32□□□□□ -1.08
YBX3-204ENST00000366290 C2orf16Q68DN1 1984 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 SF3B1O75533 1304 aaKnown RBP eCLIP8.31□□□□□ -1.08
YBX3-204ENST00000366290 NPEPPSL1A6NEC2 478 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 LOC730098B7Z3J9 87 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 K7ENM7 598 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 F2RL2O00254 374 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 CLDN3O15551 220 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 PJA2O43164 708 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 URODP06132 367 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 CNPP09543 421 aaKnown RBP8.31□□□□□ -1.08
YBX3-204ENST00000366290 FTH1P19P0C7X4 201 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 GLUD2P49448 558 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 CLCN4P51793 760 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 POU5F1Q01860 360 aaKnown RBP8.31□□□□□ -1.08
YBX3-204ENST00000366290 NHLH1Q02575 133 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 CREMQ03060 361 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 ELAVL2Q12926 359 aaKnown RBP8.31□□□□□ -1.08
YBX3-204ENST00000366290 CAMK4Q16566 473 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 KYAT1Q16773 422 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 UPP1Q16831 310 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 BMT2Q1RMZ1 405 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 USP41Q3LFD5 358 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 RNF220Q5VTB9 566 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 FUT10Q6P4F1 479 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 DCLRE1AQ6PJP8 1040 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 CD300LGQ6UXG3 332 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 RBM43Q6ZSC3 357 aaKnown RBP8.31□□□□□ -1.08
YBX3-204ENST00000366290 HDAC7Q8WUI4 952 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 SCFD1Q8WVM8 642 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 ZMAT2Q96NC0 199 aaKnown RBP8.31□□□□□ -1.08
YBX3-204ENST00000366290 PAAF1Q9BRP4 392 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 TCHPQ9BT92 498 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 CCDC94Q9BW85 323 aaPredicted RBP8.31□□□□□ -1.08
YBX3-204ENST00000366290 MRPL44Q9H9J2 332 aaKnown RBP8.31□□□□□ -1.08
YBX3-204ENST00000366290 PLEKHA5Q9HAU0 1116 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.31□□□□□ -1.08
YBX3-204ENST00000366290 PLA2G3Q9NZ20 509 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 FNIP2Q9P278 1114 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 MAN1B1Q9UKM7 699 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 GDAQ9Y2T3 454 aa8.31□□□□□ -1.08
YBX3-204ENST00000366290 USP15Q9Y4E8 981 aaPredicted RBP8.31□□□□□ -1.08
YBX3-204ENST00000366290 DOCK8Q8NF50 2099 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 A0A0B4J269 797 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 TTC26A0AVF1 554 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 TISP43B9A030 160 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 HNRNPDLO14979 420 aaKnown RBP8.3□□□□□ -1.08
YBX3-204ENST00000366290 EIF3DO15371 548 aaKnown RBP eCLIP8.3□□□□□ -1.08
YBX3-204ENST00000366290 TEX28O15482 410 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 TADA2AO75478 443 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 GCNT3O95395 438 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 MBD3O95983 291 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 PLATP00750 562 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 CLTAP09496 248 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 EPCAMP16422 314 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 RPL9P32969 192 aaKnown RBP8.3□□□□□ -1.08
YBX3-204ENST00000366290 ZBTB6Q15916 424 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 SYCP2LQ5T4T6 812 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 L1TD1Q5T7N2 865 aaKnown RBP8.3□□□□□ -1.08
YBX3-204ENST00000366290 TCTN3Q6NUS6 607 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 DOK3Q7L591 496 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 XYLT1Q86Y38 959 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 CMASQ8NFW8 434 aaPredicted RBP8.3□□□□□ -1.08
YBX3-204ENST00000366290 SMARCE1Q969G3 411 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 ZBTB45Q96K62 511 aaPredicted RBP8.3□□□□□ -1.08
YBX3-204ENST00000366290 NECTIN4Q96NY8 510 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 GSDMAQ96QA5 445 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 PHF7Q9BWX1 381 aaPredicted RBP8.3□□□□□ -1.08
YBX3-204ENST00000366290 NUP62CLQ9H1M0 184 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 ZMAT3Q9HA38 289 aaKnown RBP8.3□□□□□ -1.08
YBX3-204ENST00000366290 EXOC1Q9NV70 894 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 ANKFY1Q9P2R3 1169 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 MUTYHQ9UIF7 546 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 PCDHGB6Q9Y5F9 930 aa8.3□□□□□ -1.08
YBX3-204ENST00000366290 DOCK6Q96HP0 2047 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 ANO9A1A5B4 782 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 CFAP69A5D8W1 941 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 CASTOR2A6NHX0 329 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 ANKRD63C9JTQ0 380 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 OGTO15294 1046 aa8.29□□□□□ -1.08
YBX3-204ENST00000366290 PMM2O15305 246 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms