RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MYL4P12829 197 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 ARPC4P59998 168 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 TGFB2P61812 414 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 SNRPFP62306 86 aaKnown RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 SP2Q02086 613 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 PTPN11Q06124 597 aaPredicted RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 PIGFQ07326 219 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 ARL13AQ5H913 290 aaPredicted RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 STRA8Q7Z7C7 330 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 RP9Q8TA86 221 aaKnown RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 ZNF669Q96BR6 464 aaPredicted RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 FBXL18Q96ME1 805 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 PEBP4Q96S96 227 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 ADI1Q9BV57 179 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 SNX15Q9NRS6 342 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 PKD2L2Q9NZM6 624 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 ARHGAP28Q9P2N2 729 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 HESX1Q9UBX0 185 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 SUN2Q9UH99 717 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 MFHAS1Q9Y4C4 1052 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 PCDHGA3Q9Y5H0 932 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 TNS1Q9HBL0 1735 aaKnown RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 PRSS51A0A1B0GVH4 220 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 TRIM13O60858 407 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 BAIAP3O94812 1187 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 TRUB2O95900 331 aaKnown RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 NFICP08651 508 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 MZF1P28698 734 aaPredicted RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 SEPHS1P49903 392 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 CXCL9Q07325 125 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 LY6KQ17RY6 165 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 FAM47CQ5HY64 1035 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 EPGNQ6UW88 154 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 B3GNT9Q6UX72 402 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 SPPL2CQ8IUH8 684 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 USP33Q8TEY7 942 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 UPF1Q92900 1129 aaKnown RBP eCLIP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 EXT2Q93063 718 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 SEPHS2Q99611 448 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 ACO2Q99798 780 aaKnown RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 SLC38A10Q9HBR0 1119 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 KLHL8Q9P2G9 620 aaPredicted RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 MOSPD1Q9UJG1 213 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 TLK1Q9UKI8 766 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 CDK5RAP2Q96SN8 1893 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 PTGES3LE9PB15 166 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 HNRNPLP14866 589 aaKnown RBP eCLIP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 GRIA4P48058 902 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 PRKCQQ04759 706 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 POU5F1BQ06416 359 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 POLD3Q15054 466 aaPredicted RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 MOGQ16653 247 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 RWDD4Q6NW29 188 aaKnown RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 RSBN1LQ6PCB5 846 aaPredicted RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 RPS27LQ71UM5 84 aaKnown RBP12.87□□□□□ -0.35
VAMP1-201ENST00000361716 CADM3Q8N126 398 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 ELMO1Q92556 727 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 ZBED2Q9BTP6 218 aa12.87□□□□□ -0.35
VAMP1-201ENST00000361716 DLGAP3O95886 979 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 TSPAN8P19075 237 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 ACADVLP49748 655 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 SLC7A2P52569 658 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 SLC25A11Q02978 314 aaKnown RBP12.86□□□□□ -0.35
VAMP1-201ENST00000361716 CLCQ05315 142 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 NFATC3Q12968 1075 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 STILQ15468 1287 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 STXBP2Q15833 593 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 SUPT20HL1Q3ZLR7 823 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 PAGE2BQ5JRK9 111 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 DHFR2Q86XF0 187 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 CENPOQ9BU64 300 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 NPLQ9BXD5 320 aaPredicted RBP12.86□□□□□ -0.35
VAMP1-201ENST00000361716 GBA3Q9H227 469 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 PTPRHQ9HD43 1115 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 ITM2CQ9NQX7 267 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 MRGBPQ9NV56 204 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 NCKIPSDQ9NZQ3 722 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 ZNHIT2Q9UHR6 403 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 TSPAN16Q9UKR8 245 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 ATAD5Q96QE3 1844 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 A0A1W2PQ67 120 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 C3orf70A6NLC5 250 aaPredicted RBP12.86□□□□□ -0.35
VAMP1-201ENST00000361716 TRIM64CA6NLI5 447 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 NOTOA8MTQ0 251 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 HDAC3O15379 428 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 TFEBP19484 476 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 PRKCHP24723 683 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 SERPINB1P30740 379 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 OPRL1P41146 370 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 PTGER2P43116 358 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 NEK2P51955 445 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 TRIM25Q14258 630 aaKnown RBP12.86□□□□□ -0.35
VAMP1-201ENST00000361716 IMPG1Q17R60 797 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 TTC30AQ86WT1 665 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 CARM1Q86X55 608 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 PYROXD2Q8N2H3 581 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 ZCCHC7Q8N3Z6 543 aaKnown RBP12.86□□□□□ -0.35
VAMP1-201ENST00000361716 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
VAMP1-201ENST00000361716 C1orf50Q9BV19 199 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms