RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ATP6V1B1P15313 513 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 WASP42768 502 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 CDK18Q07002 472 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 TBL3Q12788 808 aaKnown RBP18.79■□□□□ 0.6
CLIP2-202ENST00000361545 POU5F2Q8N7G0 328 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 PCDHB18PQ96TA0 734 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 CXorf56Q9H5V9 222 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.79■□□□□ 0.6
CLIP2-202ENST00000361545 PCDHA11Q9Y5I1 949 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 CCDC154A6NI56 674 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 RASSF10A6NK89 507 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 BMP10O95393 424 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 CORO1AP31146 461 aaKnown RBP18.79■□□□□ 0.6
CLIP2-202ENST00000361545 PIK3CGP48736 1102 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 PLEKHM3Q6ZWE6 761 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 POLNQ7Z5Q5 900 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 ATG16L2Q8NAA4 619 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 KYQ8NBH2 561 aa18.79■□□□□ 0.6
CLIP2-202ENST00000361545 KIAA1522Q9P206 1035 aaPredicted RBP18.79■□□□□ 0.6
CLIP2-202ENST00000361545 NFAT5O94916 1531 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 PDE2AO00408 941 aaPredicted RBP18.78■□□□□ 0.6
CLIP2-202ENST00000361545 PARNO95453 639 aaKnown RBP18.78■□□□□ 0.6
CLIP2-202ENST00000361545 RANBP1P43487 201 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TTPAP49638 278 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 SMARCB1Q12824 385 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 PAGE2BQ5JRK9 111 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 LCLAT1Q6UWP7 414 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 VN1R5Q7Z5H4 357 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 NPAS4Q8IUM7 802 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 RNF148Q8N7C7 305 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 MYOM1P52179 1685 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 RGS14O43566 566 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 AOC2O75106 756 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 UBOX5O94941 541 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 RPL17P18621 184 aaKnown RBP18.78■□□□□ 0.6
CLIP2-202ENST00000361545 HTR1BP28222 390 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 EML3Q32P44 896 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 INTS6LQ5JSJ4 861 aaKnown RBP18.78■□□□□ 0.6
CLIP2-202ENST00000361545 PRELID2Q8N945 189 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 OSCP1Q8WVF1 389 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 SELENOMQ8WWX9 145 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 KANSL1LA0AUZ9 987 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 MEI4A8MW99 385 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 FZD9O00144 591 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 PAPSS1O43252 624 aaPredicted RBP18.78■□□□□ 0.6
CLIP2-202ENST00000361545 C4BPAP04003 597 aaKnown RBP18.78■□□□□ 0.6
CLIP2-202ENST00000361545 NQO1P15559 274 aaKnown RBP18.78■□□□□ 0.6
CLIP2-202ENST00000361545 S100A5P33763 92 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 HNF4AP41235 474 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 CAMKK1Q8N5S9 505 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 OR8D1Q8WZ84 308 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 PWWP2AQ96N64 755 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TBC1D3DA0A087WVF3 549 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TBC1D3IA0A087WXS9 549 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TBC1D3EA0A087X179 549 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TBC1D3KA0A087X1G2 549 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 IGKV6D-41A0A0C4DH26 115 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TBC1D3FA6NER0 549 aaPredicted RBP18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TBC1D3LB9A6J9 549 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 DNTTP04053 509 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TBC1D3HP0C7X1 549 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 PRKAA2P54646 552 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 ABRQ12979 859 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TRIM60Q495X7 471 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TBC1D3GQ6DHY5 549 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TBC1D3CQ6IPX1 549 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 ZNF621Q6ZSS3 439 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 TBC1D3Q8IZP1 549 aaPredicted RBP18.78■□□□□ 0.6
CLIP2-202ENST00000361545 NKAPQ8N5F7 415 aaKnown RBP18.78■□□□□ 0.6
CLIP2-202ENST00000361545 ING5Q8WYH8 240 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 COL26A1Q96A83 441 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 PCDH18Q9HCL0 1135 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 ZNF229Q9UJW7 825 aa18.78■□□□□ 0.6
CLIP2-202ENST00000361545 GSNP06396 782 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 CDK7P50613 346 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 RFWD3Q6PCD5 774 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 FAM151BQ6UXP7 276 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.77■□□□□ 0.6
CLIP2-202ENST00000361545 LGR5O75473 907 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 APOA1P02647 267 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 ITGAVP06756 1048 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 CTBP1Q13363 440 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 TMEM154Q6P9G4 183 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 METTL3Q86U44 580 aaKnown RBP18.77■□□□□ 0.6
CLIP2-202ENST00000361545 COLGALT2Q8IYK4 626 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 PTGR2Q8N8N7 351 aaPredicted RBP18.77■□□□□ 0.6
CLIP2-202ENST00000361545 ARNTL2Q8WYA1 636 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 UPF1Q92900 1129 aaKnown RBP eCLIP18.77■□□□□ 0.65e-7■■■■□ 22.8
CLIP2-202ENST00000361545 LHX5Q9H2C1 402 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.77■□□□□ 0.6
CLIP2-202ENST00000361545 M0R3G1 203 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 LPOP22079 712 aaPredicted RBP18.77■□□□□ 0.6
CLIP2-202ENST00000361545 VHLP40337 213 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 FAM45BPQ6NSW5 357 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 FAM45AQ8TCE6 357 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 ZNF75CPQ92670 426 aaPredicted RBP18.77■□□□□ 0.6
CLIP2-202ENST00000361545 TPD52L3Q96J77 140 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 BTN2A3PQ96KV6 586 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 MAP10Q9P2G4 905 aa18.77■□□□□ 0.6
CLIP2-202ENST00000361545 DEC1Q9P2X7 70 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms