RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 CHST9Q7L1S5 443 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 LMLNQ96KR4 655 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 SEMA4AQ9H3S1 761 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 MEIS2O14770 477 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 SCN2BO60939 215 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 HNRNPCP07910 306 aaKnown RBP eCLIP20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 PRSS55Q6UWB4 352 aaPredicted RBP20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 CASP12Q6UXS9 341 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 ANGPT4Q9Y264 503 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 CCT8L1PA6NM43 557 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 CFIP05156 583 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 CORO1AP31146 461 aaKnown RBP20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 CLCNKBP51801 687 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 IRF8Q02556 426 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 TAF10Q12962 218 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 LPIN1Q14693 890 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 SF1Q15637 639 aaKnown RBP20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 EEF1DP3Q658K8 133 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 SCUBE1Q8IWY4 988 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 ARHGEF3Q9NR81 526 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 INVSQ9Y283 1065 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 SLC35G4P0C7Q5 338 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 CCL14Q16627 93 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 TCP10LQ8TDR4 215 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 OSBPL2Q9H1P3 480 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 CRABP2P29373 138 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 RHBDL3P58872 404 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 FAM126BQ8IXS8 530 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 HJURPQ8NCD3 748 aaPredicted RBP20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 PPTC7Q8NI37 304 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 OSCP1Q8WVF1 389 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 SNRNP25Q9BV90 132 aaKnown RBP20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 ACSS2Q9NR19 701 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 PSMD13Q9UNM6 376 aa20.51■□□□□ 0.87
CDC42BPB-201ENST00000361246 RIC1Q4ADV7 1423 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 OR6B1O95007 311 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 COPZ1P61923 177 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 TRIM25Q14258 630 aaKnown RBP20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 PROX1Q92786 737 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 NDUFAF1Q9Y375 327 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 DPYSL3Q14195 570 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 CHST7Q9NS84 486 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 VWDEQ8N2E2 1590 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 SNTNA6NMZ2 147 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 PECAM1P16284 738 aaPredicted RBP20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 NKX2-3Q8TAU0 364 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 MTMR9Q96QG7 549 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 TMEM134Q9H6X4 195 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 PCDH9Q9HC56 1237 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 PAIP2BQ9ULR5 123 aaKnown RBP20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 CYP4F8P98187 520 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 FOXM1Q08050 763 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 STX4Q12846 297 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 TMC5Q6UXY8 1006 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 LZTR1Q8N653 840 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 RNF145Q96MT1 663 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 ARMCX1Q9P291 453 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 RGS1Q08116 209 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 C9orf57Q5W0N0 161 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 TAF8Q7Z7C8 310 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 S100A13Q99584 98 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 AVENQ9NQS1 362 aaPredicted RBP20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 SNX6Q9UNH7 406 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 PCDHA11Q9Y5I1 949 aa20.5■□□□□ 0.87
CDC42BPB-201ENST00000361246 ITPKBP27987 946 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 FKBP1AP62942 108 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 PAGE2BQ5JRK9 111 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 FAM46CQ5VWP2 391 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 FAM171BQ6P995 826 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 TRAF7Q6Q0C0 670 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 SAPCD2Q86UD0 394 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 IZUMO1Q8IYV9 350 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 REXO5Q96IC2 774 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 PSMD10O75832 226 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 ZCCHC18P0CG32 403 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 PPM1AP35813 382 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 PKN2Q16513 984 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 UAP1L1Q3KQV9 507 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 C1orf186Q6ZWK4 172 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 AGO1Q9UL18 857 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 PIPSLA2A3N6 862 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 ARF4P18085 180 aaPredicted RBP20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 S100A3P33764 101 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 FBXO30Q8TB52 745 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 GTPBP2Q9BX10 602 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 POLR1BQ9H9Y6 1135 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 RPRD1BQ9NQG5 326 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 CHKBQ9Y259 395 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 SLC31A1O15431 190 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 PAPSS1O43252 624 aaPredicted RBP20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 SKP1P63208 163 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 ACSM2AQ08AH3 577 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 GNA13Q14344 377 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 AMZ1Q400G9 498 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 ACSM2BQ68CK6 577 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 PSTKQ8IV42 348 aaKnown RBP20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 GRIP2Q9C0E4 1043 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 DPEP2Q9H4A9 486 aa20.49■□□□□ 0.87
CDC42BPB-201ENST00000361246 SPATA31C2B4DYI2 1134 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms