RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 USP1O94782 785 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 CSPG5O95196 566 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 EPOP01588 193 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 INHBAP08476 426 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 AVPR1AP37288 418 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 SERPINB9P50453 376 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 CYP4F8P98187 520 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 SLC12A1Q13621 1099 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 ZNF235Q14590 738 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 RALGPS1Q5JS13 557 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 SYCP2LQ5T4T6 812 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 IL31Q6EBC2 164 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 CES5AQ6NT32 575 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 CASC4Q6P4E1 433 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 UNC5AQ6ZN44 842 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 TMEM135Q86UB9 458 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 EXOC3L1Q86VI1 746 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 SLC26A11Q86WA9 606 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 CFAP52Q8N1V2 620 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 VN1R2Q8NFZ6 395 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 ADAMTS19Q8TE59 1207 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 USP33Q8TEY7 942 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 TADA1Q96BN2 335 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 OTUB2Q96DC9 234 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 MTBPQ96DY7 904 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 CFAP36Q96G28 342 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 PRICKLE1Q96MT3 831 aaPredicted RBP13.71□□□□□ -0.21
CCDC197-201ENST00000359253 ASB2Q96Q27 587 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 SLC22A12Q96S37 553 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 PAFAH2Q99487 392 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 SLC46A2Q9BY10 475 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 PDFQ9HBH1 243 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 SMPD4Q9NXE4 827 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 TBC1D14Q9P2M4 693 aa13.71□□□□□ -0.21
CCDC197-201ENST00000359253 NUP205Q92621 2012 aa13.71□□□□□ -0.22
CCDC197-201ENST00000359253 COL6A3P12111 3177 aa13.71□□□□□ -0.22
CCDC197-201ENST00000359253 OBSL1O75147 1896 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 FAM159BA6NKW6 160 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 H0Y626 953 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 LEFTY2O00292 366 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 LINC01565O15544 149 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 TBL1XO60907 577 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 LUC7L3O95232 432 aaKnown RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 CYBBP04839 570 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 RHOP08100 348 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 EPCAMP16422 314 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 KCNA5P22460 613 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 MGAT1P26572 445 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 GCAP28676 217 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 GBP2P32456 591 aaPredicted RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 HPDP32754 393 aaPredicted RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 ADRA1AP35348 466 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 MDH1P40925 334 aaKnown RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 GRIA1P42261 906 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 SESN2P58004 480 aaPredicted RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 RPS24P62847 133 aaKnown RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 DLX2Q07687 328 aaPredicted RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 SLC10A7Q0GE19 358 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 ILF2Q12905 390 aaKnown RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 DNAJC3Q13217 504 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 INO80DQ53TQ3 878 aaPredicted RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 PCID2Q5JVF3 399 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 ATAT1Q5SQI0 421 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 GPR158Q5T848 1215 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 RNF43Q68DV7 783 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 SYCE2Q6PIF2 218 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 RANBP10Q6VN20 620 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 EP400NLQ6ZTU2 488 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 OTOP3Q7RTS5 596 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 CMTM8Q8IZV2 173 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 AGGF1Q8N302 714 aaeCLIP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 SMRP1Q8NCR6 262 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 OR52K1Q8NGK4 314 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 GABPB2Q8TAK5 448 aaPredicted RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 SHKBP1Q8TBC3 707 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 OXNAD1Q96HP4 312 aaPredicted RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 NECTIN4Q96NY8 510 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 PSKH2Q96QS6 385 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 FSD1LQ9BXM9 530 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 SFXN1Q9H9B4 322 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 KIF9Q9HAQ2 790 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 ATP13A1Q9HD20 1204 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 NT5MQ9NPB1 228 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 NSMCE4AQ9NXX6 385 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 CFAP97Q9P2B7 532 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 DNMT3BQ9UBC3 853 aaKnown RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 UBA2Q9UBT2 640 aaPredicted RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 SOX13Q9UN79 622 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 SMG5Q9UPR3 1016 aaKnown RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 TTLL3Q9Y4R7 772 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 ARIH1Q9Y4X5 557 aaPredicted RBP13.7□□□□□ -0.22
CCDC197-201ENST00000359253 FAM169AQ9Y6X4 670 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 DENND4CQ5VZ89 1909 aa13.7□□□□□ -0.22
CCDC197-201ENST00000359253 GRXCR2A6NFK2 248 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 TBX10O75333 385 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 KRT37O76014 449 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 KRT38O76015 456 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 KRT15P19012 456 aa13.69□□□□□ -0.22
CCDC197-201ENST00000359253 HOXD9P28356 352 aaPredicted RBP13.69□□□□□ -0.22
CCDC197-201ENST00000359253 ACVRL1P37023 503 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms