RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 MAMLD1Q13495 774 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 LRRC38Q5VT99 294 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 OFCC1Q8IZS5 231 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 PIK3R3Q92569 461 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 CELF1Q92879 486 aaKnown RBP8.87□□□□□ -0.99
COL6A6-201ENST00000358511 APBA2Q99767 749 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 MECRQ9BV79 373 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 UBP1Q9NZI7 540 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 EMC3Q9P0I2 261 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 ERCC6L2Q5T890 1561 aa8.87□□□□□ -0.99
COL6A6-201ENST00000358511 CPSF4O95639 269 aaKnown RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 CHKAP35790 457 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 CCNFP41002 786 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PLK1P53350 603 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 TPTEP56180 551 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PGAM4Q8N0Y7 254 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 OR8H3Q8N146 312 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 RXFP2Q8WXD0 754 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 ZNF668Q96K58 619 aaPredicted RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 ACOX2Q99424 681 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 ADGRE3Q9BY15 652 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 CDHR5Q9HBB8 845 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 TMEM138Q9NPI0 162 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 DNAJC28Q9NX36 388 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 M0QX08 132 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PDLIM1O00151 329 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 NELFEP18615 380 aaKnown RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PSMD4P55036 377 aaKnown RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 MED28Q9H204 178 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 DPP3Q9NY33 737 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PRR12Q9ULL5 1215 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 ABT1Q9ULW3 272 aaKnown RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 OVOS2A0A0J9YW53 1432 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 OVOS2Q6IE36 1432 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 TIPRLO75663 272 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 FBXO21O94952 628 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PAGE2BQ5JRK9 111 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 IL27RAQ6UWB1 636 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 GATAD2AQ86YP4 633 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 OR8H1Q8NGG4 311 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 DNAJB14Q8TBM8 379 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 SLC47A1Q96FL8 570 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 CLPTM1LQ96KA5 538 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 FICDQ9BVA6 458 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PRDM16Q9HAZ2 1276 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PREBQ9HCU5 417 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 SSU72Q9NP77 194 aaKnown RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PBX1P40424 430 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 NPTX2P47972 431 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 NAGLUP54802 743 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 AKIRIN2Q53H80 203 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 AADACL2Q6P093 401 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 FAM131AQ6UXB0 335 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 NCCRP1Q6ZVX7 275 aaPredicted RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 RGS10O43665 173 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 SDC2P34741 201 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 NOTUMQ6P988 496 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 SV2AQ7L0J3 742 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 HPS6Q86YV9 775 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 UCMAQ8WVF2 138 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 CERS2Q96G23 380 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 TMEM109Q9BVC6 243 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 ACE2Q9BYF1 805 aaPredicted RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 DHX33Q9H6R0 707 aaKnown RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 SCUBE2Q9NQ36 999 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 ETNK2Q9NVF9 386 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 MAGEL2Q9UJ55 1249 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 SPATA31D1Q6ZQQ2 1576 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 BCKDKO14874 412 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 KHDRBS3O75525 346 aaKnown RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 ITGA2P17301 1181 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PIK3CGP48736 1102 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 SLC12A3P55017 1021 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 TNS4Q8IZW8 715 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 CDYL2Q8N8U2 506 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 EPS8L1Q8TE68 723 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 BHMTQ93088 406 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 HOPXQ9BPY8 73 aaPredicted RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 CDH19Q9H159 772 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 LMTK3Q96Q04 1460 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 TRAFD1O14545 582 aaPredicted RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 FADS2O95864 444 aaKnown RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 GRK4P32298 578 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 CRHR1P34998 444 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 SLC7A2P52569 658 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 IL18R1Q13478 541 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 P2RY8Q86VZ1 359 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 MOSPD2Q8NHP6 518 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 METTL6Q8TCB7 284 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 KATNAL1Q9BW62 490 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 CYP3A43Q9HB55 503 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 NMRK2Q9NPI5 230 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 FAM240BA0A1B0GVZ2 78 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 CDC40O60508 579 aaKnown RBP eCLIP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 MARCKSL1P49006 195 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 PTPN11Q06124 597 aaPredicted RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 RBM20Q5T481 1227 aaKnown RBP8.86□□□□□ -0.99
COL6A6-201ENST00000358511 IER5Q5VY09 327 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 POLNQ7Z5Q5 900 aa8.86□□□□□ -0.99
COL6A6-201ENST00000358511 THAP5Q7Z6K1 395 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms