RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 FCRL4Q96PJ5 515 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 TAF1DQ9H5J8 278 aaPredicted RBP9.87□□□□□ -0.83
CHD3-202ENST00000358181 CYP3A43Q9HB55 503 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 AK5Q9Y6K8 562 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 CASRP41180 1078 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 PSMD7P51665 324 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 GALNT3Q14435 633 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 RFX4Q33E94 735 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 OAFQ86UD1 273 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 PRMT6Q96LA8 375 aaPredicted RBP9.87□□□□□ -0.83
CHD3-202ENST00000358181 TMEM79Q9BSE2 394 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 XPNPEP3Q9NQH7 507 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 ATAD3AQ9NVI7 634 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 ZNF226Q9NYT6 803 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 VSTM5A8MXK1 200 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 PGDP52209 483 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 COPAP53621 1224 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 ZNF792Q3KQV3 632 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 C1orf189Q5VU69 101 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 HFE2Q6ZVN8 426 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 METTL16Q86W50 562 aaKnown RBP9.87□□□□□ -0.83
CHD3-202ENST00000358181 CLHC1Q8NHS4 586 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 RASSF5Q8WWW0 418 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 ACAT2Q9BWD1 397 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 GSDMCQ9BYG8 508 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 MROH8Q9H579 483 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 CD248Q9HCU0 757 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 IFT46Q9NQC8 304 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 LAMC1P11047 1609 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 C1QTNF3-AMACRE9PGA6 284 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 TM9SF1O15321 606 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 PDE5AO76074 875 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 SLC25A27O95847 323 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 TPP2P29144 1249 aaPredicted RBP9.87□□□□□ -0.83
CHD3-202ENST00000358181 TKTL1P51854 596 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 CBX3Q13185 183 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 OASLQ15646 514 aaKnown RBP9.87□□□□□ -0.83
CHD3-202ENST00000358181 SUGP1Q8IWZ8 645 aaKnown RBP9.87□□□□□ -0.83
CHD3-202ENST00000358181 ZCCHC7Q8N3Z6 543 aaKnown RBP9.87□□□□□ -0.83
CHD3-202ENST00000358181 COQ8BQ96D53 544 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 DGCR6LQ9BY27 220 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.87□□□□□ -0.83
CHD3-202ENST00000358181 MID1IP1Q9NPA3 183 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 IQSEC2Q5JU85 1478 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 JCHAINP01591 159 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 STAT5AP42229 794 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 TOP3AQ13472 1001 aaPredicted RBP9.87□□□□□ -0.83
CHD3-202ENST00000358181 DGCR6Q14129 220 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 OR5M3Q8NGP4 307 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 NEDD1Q8NHV4 660 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 TET3O43151 1660 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 C19orf81C9J6K1 198 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 MYL9P24844 172 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 GRK5P34947 590 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 PIK3CGP48736 1102 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 PKN1Q16512 942 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 SPIN3Q5JUX0 258 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 HYIQ5T013 277 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 COL23A1Q86Y22 540 aaPredicted RBP9.87□□□□□ -0.83
CHD3-202ENST00000358181 POLLQ9UGP5 575 aa9.87□□□□□ -0.83
CHD3-202ENST00000358181 URADA6NGE7 173 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 H3BNH8 94 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 SP3Q02447 781 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 CYP27C1Q4G0S4 372 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 CXorf57Q6NSI4 855 aaKnown RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 SH2D3CQ8N5H7 860 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 ZNF433Q8N7K0 673 aaPredicted RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 EMID1Q96A84 441 aaPredicted RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 MCRS1Q96EZ8 462 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 POP1Q99575 1024 aaKnown RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 SMAD9O15198 467 aaKnown RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 NR3C2P08235 984 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 TUBP50607 506 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 BNIP3Q12983 259 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 DGKZQ13574 1117 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 ITGA9Q13797 1035 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 C16orf86Q6ZW13 317 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 FAM131BQ86XD5 332 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 DENND1CQ8IV53 801 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 DMGDHQ9UI17 866 aaKnown RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 INVSQ9Y283 1065 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 ADCY10Q96PN6 1610 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 STK36Q9NRP7 1315 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 FSBPO95073 299 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 PGAM2P15259 253 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 NT5EP21589 574 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 RENBPP51606 427 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 MAP1SQ66K74 1059 aaPredicted RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 OR2L8Q8NGY9 312 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 VANGL1Q8TAA9 524 aaPredicted RBP9.86□□□□□ -0.83
CHD3-202ENST00000358181 IGDCC4Q8TDY8 1250 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 CKAP2Q8WWK9 683 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 RUSC1Q9BVN2 902 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 CEP44Q9C0F1 390 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 IL25Q9H293 177 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 SEMA6AQ9H2E6 1030 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 SLC28A3Q9HAS3 691 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 ASAH2Q9NR71 780 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 ENAMQ9NRM1 1142 aa9.86□□□□□ -0.83
CHD3-202ENST00000358181 RDH8Q9NYR8 311 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms