RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 CEP44Q9C0F1 390 aa15.11■□□□□ 0.01
CCNE1-202ENST00000357943 NT5MQ9NPB1 228 aa15.11■□□□□ 0.01
CCNE1-202ENST00000357943 HOMER3Q9NSC5 361 aa15.11■□□□□ 0.01
CCNE1-202ENST00000357943 DLGAP2Q9P1A6 1054 aa15.11■□□□□ 0.01
CCNE1-202ENST00000357943 LHX3Q9UBR4 397 aa15.11■□□□□ 0.01
CCNE1-202ENST00000357943 SEPT3Q9UH03 358 aa15.11■□□□□ 0.01
CCNE1-202ENST00000357943 MMP17Q9ULZ9 603 aa15.11■□□□□ 0.01
CCNE1-202ENST00000357943 ZNF148Q9UQR1 794 aa15.11■□□□□ 0.01
CCNE1-202ENST00000357943 MRFAP1Q9Y605 127 aa15.11■□□□□ 0.01
CCNE1-202ENST00000357943 GOLGA6L10A0A0M3HER8 536 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 A0A1W2PQF6 199 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 TTC24A2A3L6 582 aaPredicted RBP15.1■□□□□ 0.01
CCNE1-202ENST00000357943 CHURC1-FNTBB4DL54 471 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 GJB3O75712 270 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 AOC1P19801 751 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 COL9A1P20849 921 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 RPS9P46781 194 aaKnown RBP15.1■□□□□ 0.01
CCNE1-202ENST00000357943 RHOAP61586 193 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 ZNF235Q14590 738 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 E2F5Q15329 346 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 CYP1B1Q16678 543 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 HSF5Q4G112 596 aaPredicted RBP15.1■□□□□ 0.01
CCNE1-202ENST00000357943 TEX44Q53QW1 395 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 ATXN7L2Q5T6C5 722 aaPredicted RBP15.1■□□□□ 0.01
CCNE1-202ENST00000357943 C9orf64Q5T6V5 341 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 SDE2Q6IQ49 451 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 KIAA1211LQ6NV74 962 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 TTC27Q6P3X3 843 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 TMEM92Q6UXU6 159 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 METTL3Q86U44 580 aaKnown RBP15.1■□□□□ 0.01
CCNE1-202ENST00000357943 PCDH20Q8N6Y1 951 aaKnown RBP15.1■□□□□ 0.01
CCNE1-202ENST00000357943 FAM71DQ8N9W8 422 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 OR2A12Q8NGT7 310 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 ISG20Q96AZ6 181 aaKnown RBP15.1■□□□□ 0.01
CCNE1-202ENST00000357943 AGAP3Q96P47 875 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 CHRDQ9H2X0 955 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 SLC8A2Q9UPR5 921 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 TTLL3Q9Y4R7 772 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 SHROOM3Q8TF72 1996 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 EDDM13A0A1B0GTR0 161 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 RNF103O00237 685 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 PHF2O75151 1096 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 SIN3BO75182 1162 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 HLA-DQB2P05538 268 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 ITGAVP06756 1048 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 HOXB2P14652 356 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 EOGTQ5NDL2 527 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 DPY19L3Q6ZPD9 716 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 ZNF567Q8N184 647 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.1■□□□□ 0.01
CCNE1-202ENST00000357943 C12orf50Q8NA57 414 aaPredicted RBP15.1■□□□□ 0.01
CCNE1-202ENST00000357943 OR2AP1Q8NGE2 309 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 OR6K2Q8NGY2 324 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 PBXIP1Q96AQ6 731 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 MGME1Q9BQP7 344 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 DDX47Q9H0S4 455 aaKnown RBP15.1■□□□□ 0.01
CCNE1-202ENST00000357943 PRSS16Q9NQE7 514 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 SUN2Q9UH99 717 aa15.1■□□□□ 0.01
CCNE1-202ENST00000357943 ZBTB24O43167 697 aaPredicted RBP15.09■□□□□ 0.01
CCNE1-202ENST00000357943 MTSS1O43312 755 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 NEBLO76041 1014 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 GKP32189 559 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 COILP38432 576 aaPredicted RBP15.09■□□□□ 0.01
CCNE1-202ENST00000357943 CLCN5P51795 746 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 MTAPQ13126 283 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 CRY1Q16526 586 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 CARD16Q5EG05 197 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 CCDC137Q6PK04 289 aaKnown RBP15.09■□□□□ 0.01
CCNE1-202ENST00000357943 SYT13Q7L8C5 426 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 PRUNE1Q86TP1 453 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 BBS5Q8N3I7 341 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 CHST14Q8NCH0 376 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 SPATA4Q8NEY3 305 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 CCDC110Q8TBZ0 833 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 TEKT5Q96M29 485 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 CCDC114Q96M63 670 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 FERMT1Q9BQL6 677 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 CD248Q9HCU0 757 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 DRG1Q9Y295 367 aaKnown RBP15.09■□□□□ 0.01
CCNE1-202ENST00000357943 ATP8A1Q9Y2Q0 1164 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 DMDP11532 3685 aa15.09■□□□□ 0.01
CCNE1-202ENST00000357943 TARSL2A2RTX5 802 aaKnown RBP15.08■□□□□ 0
CCNE1-202ENST00000357943 CFAP69A5D8W1 941 aa15.08■□□□□ 0
CCNE1-202ENST00000357943 INSIG1O15503 277 aa15.08■□□□□ 0
CCNE1-202ENST00000357943 SYNCRIPO60506 623 aaKnown RBP15.08■□□□□ 0
CCNE1-202ENST00000357943 ATG13O75143 517 aa15.08■□□□□ 0
CCNE1-202ENST00000357943 IFNB1P01574 187 aa15.08■□□□□ 0
CCNE1-202ENST00000357943 CR2P20023 1033 aa15.08■□□□□ 0
CCNE1-202ENST00000357943 STIP1P31948 543 aaKnown RBP15.08■□□□□ 0
CCNE1-202ENST00000357943 CD68P34810 354 aaPredicted RBP15.08■□□□□ 0
CCNE1-202ENST00000357943 SCNN1BP51168 640 aa15.08■□□□□ 0
CCNE1-202ENST00000357943 CCNHP51946 323 aaPredicted RBP15.08■□□□□ 0
CCNE1-202ENST00000357943 SNRPD1P62314 119 aaKnown RBP15.08■□□□□ 0
CCNE1-202ENST00000357943 ITKQ08881 620 aa15.08■□□□□ 0
CCNE1-202ENST00000357943 NSUN2Q08J23 767 aaKnown RBP eCLIP15.08■□□□□ 0
CCNE1-202ENST00000357943 CAMK2GQ13555 558 aaPredicted RBP15.08■□□□□ 0
CCNE1-202ENST00000357943 STARD3Q14849 445 aa15.08■□□□□ 0
CCNE1-202ENST00000357943 WHAMMP3Q1A5X7 153 aa15.08■□□□□ 0
CCNE1-202ENST00000357943 PID1Q7Z2X4 250 aa15.08■□□□□ 0
CCNE1-202ENST00000357943 STK40Q8N2I9 435 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms