RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 CCNJQ5T5M9 372 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 SPOCD1Q6ZMY3 1216 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 LURAP1LQ8IV03 231 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 LYSMD2Q8IV50 215 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 CADM2Q8N3J6 435 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 RDH13Q8NBN7 331 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 PIK3C3Q8NEB9 887 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.95■□□□□ 0.14
RTN3-205ENST00000356000 PMEPA1Q969W9 287 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 PPWD1Q96BP3 646 aaKnown RBP15.95■□□□□ 0.14
RTN3-205ENST00000356000 SLC10A4Q96EP9 437 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 METTL2AQ96IZ6 378 aaKnown RBP15.95■□□□□ 0.14
RTN3-205ENST00000356000 VANGL2Q9ULK5 521 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 CFL2Q9Y281 166 aa15.95■□□□□ 0.14
RTN3-205ENST00000356000 UBE4BO95155 1302 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 TEX51A0A1B0GUA7 166 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 TADA2AO75478 443 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 C7P10643 843 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 PPP5CP53041 499 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 TNFAIP2Q03169 654 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 TRAP1Q12931 704 aaKnown RBP15.94■□□□□ 0.14
RTN3-205ENST00000356000 KRT39Q6A163 491 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 USP17L2Q6R6M4 530 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 ERMP1Q7Z2K6 904 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 GALNT12Q8IXK2 581 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 OR5H6Q8NGV6 325 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 CYGBQ8WWM9 190 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 OR52B2Q96RD2 323 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 FUNDC2Q9BWH2 189 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 PCDHAC1Q9H158 963 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 MRPL40Q9NQ50 206 aaKnown RBP15.94■□□□□ 0.14
RTN3-205ENST00000356000 TCF7L2Q9NQB0 619 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 NPAP1Q9NZP6 1156 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 SEPT10Q9P0V9 454 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 KAT6AQ92794 2004 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 hCG_1818297A0A087WSY0 165 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 SAC3D1A6NKF1 404 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 TRDMT1O14717 391 aaKnown RBP15.94■□□□□ 0.14
RTN3-205ENST00000356000 SYNCRIPO60506 623 aaKnown RBP15.94■□□□□ 0.14
RTN3-205ENST00000356000 SNX2O60749 519 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 ABCB7O75027 752 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 TIPRLO75663 272 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 KRT1P04264 644 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 GCLMP48507 274 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 ALDH7A1P49419 539 aaKnown RBP15.94■□□□□ 0.14
RTN3-205ENST00000356000 CLK2P49760 499 aaKnown RBP15.94■□□□□ 0.14
RTN3-205ENST00000356000 HIST2H2ACQ16777 129 aaPredicted RBP15.94■□□□□ 0.14
RTN3-205ENST00000356000 ANO4Q32M45 955 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 BROXQ5VW32 411 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 DCUN1D2Q6PH85 259 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 TIFABQ6ZNK6 161 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 LINC00523Q86TU6 105 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 EPHX4Q8IUS5 362 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 OFCC1Q8IZS5 231 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 CLYBLQ8N0X4 340 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 MAPK15Q8TD08 544 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 OMA1Q96E52 524 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 SEZ6LQ9BYH1 1024 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 CDY2AQ9Y6F7 541 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 CDY1Q9Y6F8 540 aa15.94■□□□□ 0.14
RTN3-205ENST00000356000 FAM25AB3EWG3 89 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 FAM25CB3EWG5 89 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 FAM25GB3EWG6 89 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 PLIN3O60664 434 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 DAB1O75553 588 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 DLGAP3O95886 979 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 TARDBPQ13148 414 aaKnown RBP eCLIP15.93■□□□□ 0.14
RTN3-205ENST00000356000 CBLBQ13191 982 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 PXDC1Q5TGL8 231 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 AGAP6Q5VW22 663 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 UTS2BQ765I0 119 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 C12orf56Q8IXR9 622 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 SFRP1Q8N474 314 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 TAB3Q8N5C8 712 aaPredicted RBP15.93■□□□□ 0.14
RTN3-205ENST00000356000 NPLOC4Q8TAT6 608 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 PBXIP1Q96AQ6 731 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 AGAP4Q96P64 663 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 CITED4Q96RK1 184 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 RIOX1Q9H6W3 641 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 DIABLOQ9NR28 239 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 SMYD2Q9NRG4 433 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 UPK1BO75841 260 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 NDST3O95803 873 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 MYCP01106 439 aaPredicted RBP15.93■□□□□ 0.14
RTN3-205ENST00000356000 FOSL1P15407 271 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 NPR1P16066 1061 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 IMPDH1P20839 514 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 CAPGP40121 348 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 EIF2DP41214 584 aaKnown RBP15.93■□□□□ 0.14
RTN3-205ENST00000356000 ARCN1P48444 511 aaKnown RBP15.93■□□□□ 0.14
RTN3-205ENST00000356000 VAMP7P51809 220 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 ATN1P54259 1190 aaPredicted RBP15.93■□□□□ 0.14
RTN3-205ENST00000356000 MPP1Q00013 466 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 C10orf107Q8IVU9 208 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 LPGAT1Q92604 370 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 EYA3Q99504 573 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 VPS33BQ9H267 617 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 SCAF8Q9UPN6 1271 aaKnown RBP15.93■□□□□ 0.14
RTN3-205ENST00000356000 PLIN4Q96Q06 1357 aa15.93■□□□□ 0.14
RTN3-205ENST00000356000 CENPXA8MT69 81 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms