RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 DRICH1Q6PGQ1 229 aaPredicted RBP12.48□□□□□ -0.41
COLCA1-201ENST00000355430 SAPCD2Q86UD0 394 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 SEC14L1Q92503 715 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 BLOC1S6Q9UL45 172 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 GRM5P41594 1212 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 GRIA4P48058 902 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 NAGLUP54802 743 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 SGO1Q5FBB7 561 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 TTC7BQ86TV6 843 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 GLIS1Q8NBF1 620 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 TBL1YQ9BQ87 522 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 ADGRE3Q9BY15 652 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 ABCC13Q9NSE7 274 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 C10orf71Q711Q0 1435 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF862O60290 1169 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 TSPAN3O60637 253 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 SERPINB10P48595 397 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 PCYT1AP49585 367 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 PPIDQ08752 370 aaKnown RBP12.48□□□□□ -0.41
COLCA1-201ENST00000355430 HSDL1Q3SXM5 330 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 CD101Q93033 1021 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 DCUN1D5Q9BTE7 237 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 DNMT3LQ9UJW3 386 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 PAIP2BQ9ULR5 123 aaKnown RBP12.48□□□□□ -0.41
COLCA1-201ENST00000355430 MYRFQ9Y2G1 1151 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 TREHO43280 583 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 IGSF6O95976 241 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 CRABP2P29373 138 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 POU4F1Q01851 419 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 SLC44A4Q53GD3 710 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 PPP1R26Q5T8A7 1209 aaPredicted RBP12.48□□□□□ -0.41
COLCA1-201ENST00000355430 WSCD1Q658N2 575 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 DDHD1Q8NEL9 900 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 PAWRQ96IZ0 340 aaKnown RBP12.48□□□□□ -0.41
COLCA1-201ENST00000355430 NT5MQ9NPB1 228 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 RBM22Q9NW64 420 aaKnown RBP eCLIP12.48□□□□□ -0.41
COLCA1-201ENST00000355430 TRHDEQ9UKU6 1024 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 FAM95CA0A1B0GW59 222 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 TMEM114B3SHH9 223 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 PMM2O15305 246 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 MAGEC1O60732 1142 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 SYN1P17600 705 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 PTPN1P18031 435 aaKnown RBP12.48□□□□□ -0.41
COLCA1-201ENST00000355430 CHRM3P20309 590 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 EPHA3P29320 983 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 FAM182AQ5T1J6 154 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 RBM44Q6ZP01 1051 aaKnown RBP12.48□□□□□ -0.41
COLCA1-201ENST00000355430 C18orf25Q96B23 403 aaPredicted RBP12.48□□□□□ -0.41
COLCA1-201ENST00000355430 RCN3Q96D15 328 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 CAB39LQ9H9S4 337 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 CASS4Q9NQ75 786 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 ADAM28Q9UKQ2 775 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 CHD4Q14839 1912 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 TCRBV7S3A2A0A539 114 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 BAIAP3O94812 1187 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 ACSBG2Q5FVE4 666 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 HPS6Q86YV9 775 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 CLVS1Q8IUQ0 354 aaPredicted RBP12.47□□□□□ -0.41
COLCA1-201ENST00000355430 FBXW8Q8N3Y1 598 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 DACT3Q96B18 629 aaPredicted RBP12.47□□□□□ -0.41
COLCA1-201ENST00000355430 CDH19Q9H159 772 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 FBXO10Q9UK96 956 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 PAPSS1O43252 624 aaPredicted RBP12.47□□□□□ -0.41
COLCA1-201ENST00000355430 SOAT2O75908 522 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 TMEM63AO94886 807 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 ACRP10323 421 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 UQCRBP14927 111 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF697Q5TEC3 545 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 IRAK1BP1Q5VVH5 260 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 TXNRD3NBQ6F5E7 133 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 SLC22A9Q8IVM8 553 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 CPA6Q8N4T0 437 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 PLD5Q8N7P1 536 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 RSPH1Q8WYR4 309 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 ATP13A1Q9HD20 1204 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 PCDHGC3Q9UN70 934 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 RGSL1A5PLK6 1076 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 RAMP2O60895 175 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 MSX2P35548 267 aaPredicted RBP12.47□□□□□ -0.41
COLCA1-201ENST00000355430 CCL14Q16627 93 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 VWA5B1Q5TIE3 1220 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 MRNIPQ6NTE8 343 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 UGT3A1Q6NUS8 523 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 EFL1Q7Z2Z2 1120 aaKnown RBP12.47□□□□□ -0.41
COLCA1-201ENST00000355430 LGI2Q8N0V4 545 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 DLG3Q92796 817 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 OMDQ99983 421 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 KCTD14Q9BQ13 255 aaPredicted RBP12.47□□□□□ -0.41
COLCA1-201ENST00000355430 GORASP1Q9BQQ3 440 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 RUBCNLQ9H714 662 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 MARCH2Q9P0N8 246 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 HES2Q9Y543 173 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 COMMD3-BMI1R4GMX3 469 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 ADH1CP00326 375 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 PIK3R1P27986 724 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 PEX6Q13608 980 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 AAK1Q2M2I8 961 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms