RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 SLC9A7Q96T83 725 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 TELO2Q9Y4R8 837 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 FAM205AQ6ZU69 1335 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 LHX1P48742 406 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 BTN3A2P78410 334 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 LIPMQ5VYY2 423 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 BORAQ6PGQ7 559 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 STRADAQ7RTN6 431 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 EBF2Q9HAK2 575 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 FAM237AA0A1B0GTK4 181 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 SULT1B1O43704 296 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 TFRCP02786 760 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 PTPN7P35236 360 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 MTERF2Q49AM1 385 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 NOTUMQ6P988 496 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 PI16Q6UXB8 463 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 HIPK1Q86Z02 1210 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 RNF135Q8IUD6 432 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 GIT1Q9Y2X7 761 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 CRTAPO75718 401 aaPredicted RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 C11orf74Q86VG3 221 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 LRRC47Q8N1G4 583 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 GPRASP2Q96D09 838 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 CENPNQ96H22 339 aaPredicted RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 MLXIPLQ9NP71 852 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 AP1M2Q9Y6Q5 423 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 GNRH1P01148 92 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 FCER2P06734 321 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ACOX1Q15067 660 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 DDX43Q9NXZ2 648 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 COQ6Q9Y2Z9 468 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 TTLL8A6PVC2 850 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 CDC40O60508 579 aaKnown RBP eCLIP8.11□□□□□ -1.111e-6■■■■■ 30.2
HTT-201ENST00000355072 MYL3P08590 195 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ATF4P18848 351 aaPredicted RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 YWHAQP27348 245 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ULK3Q6PHR2 472 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 GRAMD1CQ8IYS0 662 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 C2orf80Q0P641 193 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 ZSWIM7Q19AV6 140 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 SCARA5Q6ZMJ2 495 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 SERAC1Q96JX3 654 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 SIK2Q9H0K1 926 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 TMEM168Q9H0V1 697 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 ZNF70Q9UC06 446 aaPredicted RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 TSTD3H0UI37 97 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 RPS7P62081 194 aaKnown RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 ASB9Q96DX5 294 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 ZNF185O15231 689 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 GABRB2P47870 512 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 PSEN1P49768 467 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 KCNMB4Q86W47 210 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 CLYBLQ8N0X4 340 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 DNAJA4Q8WW22 397 aaPredicted RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 MRI1Q9BV20 369 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 KIAA1683Q9H0B3 1180 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 GNEQ9Y223 722 aaKnown RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 CACNA1CQ13936 2221 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 NPHP3-ACAD11A0A0J9YXS1 232 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 CCNHP51946 323 aaPredicted RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 ZZZ3Q8IYH5 903 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 ZBTB8BQ8NAP8 495 aaPredicted RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 TMEM138Q9NPI0 162 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 FAM86C1Q9NVL1 165 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 FRMPD2Q68DX3 1309 aaPredicted RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 HOXA2O43364 376 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 PROCP04070 461 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 GMCL1Q96IK5 515 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 DPY30Q9C005 99 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 SP140LQ9H930 580 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 ANKRA2Q9H9E1 313 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 SLC9A3R1O14745 358 aaPredicted RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 NUAK1O60285 661 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 GJB6O95452 261 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 FTH1P02794 183 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 ZNF7P17097 686 aaPredicted RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 MRPS22P82650 360 aaKnown RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 AMPD2Q01433 879 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 ZNF829Q3KNS6 432 aaPredicted RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 RPTNQ6XPR3 784 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 AIF1LQ9BQI0 150 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 PUS7LQ9H0K6 701 aaKnown RBP8.1□□□□□ -1.11
HTT-201ENST00000355072 HIPK3Q9H422 1215 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 CEMIPQ8WUJ3 1361 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 A0A087WZ62 844 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 CYP7B1O75881 506 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 GNA12Q03113 381 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 PTPROQ16827 1216 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 THAP5Q7Z6K1 395 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 EHD4Q9H223 541 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 PRKAG2Q9UGJ0 569 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 CDH22Q9UJ99 828 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 PLEKHA6Q9Y2H5 1048 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 ST14Q9Y5Y6 855 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 DDX3XO00571 662 aaKnown RBP eCLIP8.1□□□□□ -1.112e-9■■□□□ 14.2
HTT-201ENST00000355072 HS6ST1O60243 411 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 CLPXO76031 633 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 SLC39A6Q13433 755 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 TEX47Q8TBZ9 253 aa8.1□□□□□ -1.11
HTT-201ENST00000355072 ZNF669Q96BR6 464 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms