RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 C16orf89Q6UX73 402 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 ANKRD13BQ86YJ7 626 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 ABHD11Q8NFV4 315 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 PEBP4Q96S96 227 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 PPP1R16BQ96T49 567 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 C17orf80Q9BSJ5 609 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 XYLT2Q9H1B5 865 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 LHX5Q9H2C1 402 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 SMOXQ9NWM0 555 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 GDAP2Q9NXN4 497 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 PTBP2Q9UKA9 531 aaKnown RBP17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 GJA3Q9Y6H8 435 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 TNPO2O14787 897 aaKnown RBP17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 AMHP03971 560 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 ALOX5P09917 674 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 PRKCAP17252 672 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 CRHR1P34998 444 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 NOMO1Q15155 1222 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 RAB6CQ53S08 254 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 UBE2UQ5VVX9 321 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 CCSAPQ6IQ19 270 aaPredicted RBP17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 RAB6CQ9H0N0 254 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 HACD3Q9P035 362 aa17.11■□□□□ 0.33
ARFGAP1-201ENST00000353546 TRIM64A6NGJ6 449 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 CLDN25C9JDP6 229 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 CHADO15335 359 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 MAP3K6O95382 1288 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 KRT19P08727 400 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 TTKP33981 857 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 WDR78Q5VTH9 848 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 HMBOX1Q6NT76 420 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 ZPBP2Q6X784 338 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 ZBTB49Q6ZSB9 765 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 PIWIL3Q7Z3Z3 882 aaKnown RBP17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 RALGPS2Q86X27 583 aaPredicted RBP17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 MAPK15Q8TD08 544 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 CSF3RQ99062 836 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 NOL6Q9H6R4 1146 aaKnown RBP17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 CRNNQ9UBG3 495 aaPredicted RBP17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 ZSCAN5BA6NJL1 495 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 KCNN4O15554 427 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 MED7O43513 233 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 MSCO60682 206 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 NOL3O60936 208 aaKnown RBP17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 PARNO95453 639 aaKnown RBP17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 FYNP06241 537 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 HMGB2P26583 209 aaKnown RBP17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 PIK3R1P27986 724 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 CSE1LP55060 971 aaKnown RBP17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 CLCQ05315 142 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 MTMR14Q8NCE2 650 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 OR52B2Q96RD2 323 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 ACO2Q99798 780 aaKnown RBP17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 MUC3BQ9H195 1237 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 PNPLA8Q9NP80 782 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 EMCNQ9ULC0 261 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 DGKBQ9Y6T7 804 aa17.1■□□□□ 0.33
ARFGAP1-201ENST00000353546 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 AURKAO14965 403 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 HOXC11O43248 304 aaPredicted RBP17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 CSH1P0DML2 217 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 CSH2P0DML3 217 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 YAP1P46937 504 aaKnown RBP17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 IST1P53990 364 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 ATP6V0D1P61421 351 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 GRM1Q13255 1194 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 LGSNQ5TDP6 509 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 LRRC71Q8N4P6 559 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 TERB1Q8NA31 727 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 TP53INP1Q96A56 240 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 IL12RB2Q99665 862 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 COG4Q9H9E3 785 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 MKS1Q9NXB0 559 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 ZNF839A8K0R7 811 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 OGTO15294 1046 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 IL18RAPO95256 599 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 APRTP07741 180 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 ARL1P40616 181 aaPredicted RBP17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 PTPN9P43378 593 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 RAD23AP54725 363 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 LRIT3Q3SXY7 679 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 CHSY3Q70JA7 882 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 ESX1Q8N693 406 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 NATD1Q8N6N6 113 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 REPS2Q8NFH8 660 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 SLCO4A1Q96BD0 722 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 CLSTN3Q9BQT9 956 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 SLC39A3Q9BRY0 314 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 NIFKQ9BYG3 293 aaKnown RBP17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 PCDHAC1Q9H158 963 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 R3HDMLQ9H3Y0 253 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 RETREG1Q9H6L5 497 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 WDR41Q9HAD4 459 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 PLAC1Q9HBJ0 212 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 POPDC2Q9HBU9 364 aa17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 TXNDC16Q9P2K2 825 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms