RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 KBTBD2Q8IY47 623 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 CASP10Q92851 521 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 TCF7L2Q9NQB0 619 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 PDHA1P08559 390 aa22.44■■□□□ 1.18
UPF3A-201ENST00000351487 ITGAXP20702 1163 aa22.44■■□□□ 1.18
UPF3A-201ENST00000351487 KLF10Q13118 480 aa22.44■■□□□ 1.18
UPF3A-201ENST00000351487 CAPRIN2Q6IMN6 1127 aaKnown RBP22.44■■□□□ 1.18
UPF3A-201ENST00000351487 FRMD7Q6ZUT3 714 aa22.44■■□□□ 1.18
UPF3A-201ENST00000351487 SFMBT1Q9UHJ3 866 aa22.44■■□□□ 1.18
UPF3A-201ENST00000351487 CDH22Q9UJ99 828 aa22.44■■□□□ 1.18
UPF3A-201ENST00000351487 E9PBE3 544 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 HDAC3O15379 428 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 MSI1O43347 362 aaKnown RBP22.43■■□□□ 1.18
UPF3A-201ENST00000351487 KLHL41O60662 606 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 DDHD2O94830 711 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 HLA-DQB2P05538 268 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 CHRNGP07510 517 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 COX4I1P13073 169 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 THPOP40225 353 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 GRIA4P48058 902 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 ARMC3Q5W041 872 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 SCD5Q86SK9 330 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 LRRC49Q8IUZ0 686 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.43■■□□□ 1.18
UPF3A-201ENST00000351487 RTL3Q8N8U3 475 aaKnown RBP22.43■■□□□ 1.18
UPF3A-201ENST00000351487 SHKBP1Q8TBC3 707 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 KCTD4Q8WVF5 259 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 JADE3Q92613 823 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 CNDP1Q96KN2 507 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 MAN1C1Q9NR34 630 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 TREX1Q9NSU2 369 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 PLXNA3P51805 1871 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 VAPBO95292 243 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 MPSTP25325 297 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 RPL14P50914 215 aaKnown RBP22.43■■□□□ 1.18
UPF3A-201ENST00000351487 RAB10P61026 200 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 LBRQ14739 615 aaKnown RBP22.43■■□□□ 1.18
UPF3A-201ENST00000351487 GPR162Q16538 588 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 ESRP1Q6NXG1 681 aaKnown RBP22.43■■□□□ 1.18
UPF3A-201ENST00000351487 IFNL1Q8IU54 200 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 SPATA2LQ8IUW3 424 aaPredicted RBP22.43■■□□□ 1.18
UPF3A-201ENST00000351487 SLC41A1Q8IVJ1 513 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 SLC25A41Q8N5S1 370 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 OR52B2Q96RD2 323 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 RTKNQ9BST9 563 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 SPC25Q9HBM1 224 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 NDFIP2Q9NV92 336 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 FNIP2Q9P278 1114 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 PPM1HQ9ULR3 514 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 ACOT9Q9Y305 439 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 MIA3Q5JRA6 1907 aa22.43■■□□□ 1.18
UPF3A-201ENST00000351487 KCNU1A8MYU2 1149 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 ITGB1P05556 798 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 CTGFP29279 349 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 PGFP49763 221 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 MPP1Q00013 466 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 PRKAA1Q13131 559 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 KIAA0930Q6ICG6 404 aaPredicted RBP22.42■■□□□ 1.18
UPF3A-201ENST00000351487 LRRC8EQ6NSJ5 796 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 DENND6AQ8IWF6 608 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 FSTL5Q8N475 847 aaPredicted RBP22.42■■□□□ 1.18
UPF3A-201ENST00000351487 UBE2OQ9C0C9 1292 aaKnown RBP22.42■■□□□ 1.18
UPF3A-201ENST00000351487 S100A14Q9HCY8 104 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 ARHGAP26Q9UNA1 814 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 FAM95CA0A1B0GW59 222 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 WASH4PA8MWX3 477 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 LPIN1Q14693 890 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 SEL1L3Q68CR1 1132 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 RANBP10Q6VN20 620 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 MFSD6LQ8IWD5 586 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 GPR78Q96P69 363 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 SHCBP1LQ9BZQ2 653 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 RBM22Q9NW64 420 aaKnown RBP eCLIP22.42■■□□□ 1.182e-10■■■■■ 44.4
UPF3A-201ENST00000351487 RUVBL2Q9Y230 463 aaKnown RBP22.42■■□□□ 1.18
UPF3A-201ENST00000351487 INPP5FQ9Y2H2 1132 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 TTC3P53804 2025 aa22.42■■□□□ 1.18
UPF3A-201ENST00000351487 DOCK4Q8N1I0 1966 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 E9PAM4 449 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 SLCO1B7G3V0H7 640 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 INPPL1O15357 1258 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 PIGNO95427 931 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 PAMP19021 973 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 SAT1P21673 171 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 ZNF157P51786 506 aaPredicted RBP22.41■■□□□ 1.18
UPF3A-201ENST00000351487 CUL3Q13618 768 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 ARL13AQ5H913 290 aaPredicted RBP22.41■■□□□ 1.18
UPF3A-201ENST00000351487 DEFB107AQ8IZN7 70 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 C2CD4AQ8NCU7 369 aaPredicted RBP22.41■■□□□ 1.18
UPF3A-201ENST00000351487 SCYL1Q96KG9 808 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 MRGPRX2Q96LB1 330 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 ADAM2Q99965 735 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 FSD1LQ9BXM9 530 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 FTHL17Q9BXU8 183 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 PRKD2Q9BZL6 878 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.41■■□□□ 1.18
UPF3A-201ENST00000351487 SUFUQ9UMX1 484 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 HS3ST4Q9Y661 456 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 SLC22A2O15244 555 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 STMN1P16949 149 aa22.41■■□□□ 1.18
UPF3A-201ENST00000351487 YY1P25490 414 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms