RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 RPL17P18621 184 aaKnown RBP20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 KCNA4P22459 653 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 WNT3AP56704 352 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 MARC1Q5VT66 337 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 ARMC3Q5W041 872 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 KDELC1Q6UW63 502 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 CLEC14AQ86T13 490 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 FBXO22Q8NEZ5 403 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 GPR22Q99680 433 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 RHOJQ9H4E5 214 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 CCSER2Q9H7U1 834 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 ARNT2Q9HBZ2 717 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 LNPEPQ9UIQ6 1025 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 C2orf71A6NGG8 1288 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 SERPINE1P05121 402 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 ATF6P18850 670 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 GRK2P25098 689 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 ARCN1P48444 511 aaKnown RBP20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 TLE2Q04725 743 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 TNK2Q07912 1038 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 TRIM60Q495X7 471 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 SLC8B1Q6J4K2 584 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 ANKRD33Q7Z3H0 272 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 ZC3HC1Q86WB0 502 aaKnown RBP20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 C10orf107Q8IVU9 208 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 TEX26Q8N6G2 289 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 CEP295NLQ96MC4 621 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 RPRD1AQ96P16 312 aaPredicted RBP20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 CAB39LQ9H9S4 337 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 SP110Q9HB58 689 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 NT5MQ9NPB1 228 aa20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 FBXO6Q9NRD1 293 aaPredicted RBP20.65■□□□□ 0.9
CHRNA3-202ENST00000348639 ADAM12O43184 909 aa20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 EFEMP2O95967 443 aa20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 C2P06681 752 aa20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 ABCG1P45844 678 aa20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 CSRP3P50461 194 aa20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 SLC10A7Q0GE19 358 aa20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 UGP2Q16851 508 aa20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 HSF5Q4G112 596 aaPredicted RBP20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 ESRP1Q6NXG1 681 aaKnown RBP20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 PLD6Q8N2A8 252 aaKnown RBP20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 PSMG2Q969U7 264 aa20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 VPS45Q9NRW7 570 aa20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 ZNF358Q9NW07 568 aa20.64■□□□□ 0.89
CHRNA3-202ENST00000348639 VAPBO95292 243 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 PARNO95453 639 aaKnown RBP20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 CPA3P15088 417 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 GMPRP36959 345 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 SLC1A6P48664 564 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 DLG2Q15700 870 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 PARP15Q460N3 678 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 FAM91A1Q658Y4 838 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 NSMCE1Q8WV22 266 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 PABPC5Q96DU9 382 aaKnown RBP20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 CDK5RAP1Q96SZ6 601 aaKnown RBP20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 SIKE1Q9BRV8 207 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 PRKD2Q9BZL6 878 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 WWP1Q9H0M0 922 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 ATP13A1Q9HD20 1204 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 TREX1Q9NSU2 369 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 MTRRQ9UBK8 725 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 STK38LQ9Y2H1 464 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 E2F8A0AVK6 867 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 RAMP2O60895 175 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 SIN3BO75182 1162 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 AHSGP02765 367 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 KITP10721 976 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 PAMP19021 973 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 ARNTP27540 789 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 CHRNA4P43681 627 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 MAPKAPK2P49137 400 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 GRM3Q14832 879 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 POLD3Q15054 466 aaPredicted RBP20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 USP41Q3LFD5 358 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 NADSYN1Q6IA69 706 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 KDELC2Q7Z4H8 507 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 ACVR1CQ8NER5 493 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 MAGEC3Q8TD91 643 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 UTP4Q969X6 686 aaKnown RBP20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 KLHL5Q96PQ7 755 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 ATXN3LQ9H3M9 355 aa20.63■□□□□ 0.89
CHRNA3-202ENST00000348639 ITM2AO43736 263 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 ATP5BP06576 529 aaKnown RBP20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 GABRB3P28472 473 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 PTPN4P29074 926 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 OR1D2P34982 312 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 AQP5P55064 265 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 YBEYP58557 167 aaPredicted RBP20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 IL10RBQ08334 325 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 SERINC3Q13530 473 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 KRT72Q14CN4 511 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 PCSK7Q16549 785 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 KIAA1841Q6NSI8 718 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 ZNF354CQ86Y25 554 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 PIWIL2Q8TC59 973 aaKnown RBP20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 PTCD3Q96EY7 689 aaKnown RBP20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 NOD2Q9HC29 1040 aa20.62■□□□□ 0.89
CHRNA3-202ENST00000348639 MARCOQ9UEW3 520 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms