RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 YY1AP1Q9H869 796 aa5.31□□□□□ -1.56
VCAM1-202ENST00000347652 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.31□□□□□ -1.56
VCAM1-202ENST00000347652 MRPL17Q9NRX2 175 aaKnown RBP5.31□□□□□ -1.56
VCAM1-202ENST00000347652 HOMER3Q9NSC5 361 aa5.31□□□□□ -1.56
VCAM1-202ENST00000347652 UBAP1Q9NZ09 502 aa5.31□□□□□ -1.56
VCAM1-202ENST00000347652 LMCD1Q9NZU5 365 aa5.31□□□□□ -1.56
VCAM1-202ENST00000347652 CLEC1BQ9P126 229 aa5.31□□□□□ -1.56
VCAM1-202ENST00000347652 TSPAN16Q9UKR8 245 aa5.31□□□□□ -1.56
VCAM1-202ENST00000347652 NENFQ9UMX5 172 aa5.31□□□□□ -1.56
VCAM1-202ENST00000347652 HCFC2Q9Y5Z7 792 aa5.31□□□□□ -1.56
VCAM1-202ENST00000347652 IRAK3Q9Y616 596 aa5.31□□□□□ -1.56
VCAM1-202ENST00000347652 CDY1Q9Y6F8 540 aa5.31□□□□□ -1.56
VCAM1-202ENST00000347652 H0YC42 278 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 CDK2AP1O14519 115 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 TEX28O15482 410 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 CLASP2O75122 1294 aaKnown RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 XYLBO75191 536 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 BEST1O76090 585 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 LCA5LO95447 670 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 VNN2O95498 520 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 CYP1A1P04798 512 aaPredicted RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 SNRNP70P08621 437 aaKnown RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 UNGP13051 313 aaPredicted RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 ALOX12P18054 663 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 CDH5P33151 784 aaPredicted RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 IDUAP35475 653 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 ACTN3Q08043 901 aaPredicted RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 SP140Q13342 867 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 KCNC3Q14003 757 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 TBCCQ15814 346 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 CLEC16AQ2KHT3 1053 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 GOLGA7BQ2TAP0 167 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 SLC39A12Q504Y0 691 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 TDRD12Q587J7 1177 aaKnown RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 DENND5AQ6IQ26 1287 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 FSTL4Q6MZW2 842 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 DENND1BQ6P3S1 775 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 KLHDC10Q6PID8 442 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 RAD9BQ6WBX8 426 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 TRIM72Q6ZMU5 477 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 PALB2Q86YC2 1186 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 WDTC1Q8N5D0 677 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 C12orf76Q8N812 135 aaPredicted RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 C2orf15Q8WU43 125 aaKnown RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 MUL1Q969V5 352 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 CCDC42Q96M95 316 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 FAM49BQ9NUQ9 324 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 SEPT11Q9NVA2 429 aaKnown RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 BDP1A6H8Y1 2624 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 A0A087X0T9 212 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 WDR27A2RRH5 827 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 LRRC14BA6NHZ5 514 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 EIF3CLB5ME19 914 aaKnown RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 CLDN5O00501 218 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 TXNL1O43396 289 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 LSM8O95777 96 aaKnown RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 FAM228BP0C875 321 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 FSHRP23945 695 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 ADORA2BP29275 332 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 OR1D2P34982 312 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 CYLC1P35663 651 aaPredicted RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 GPD2P43304 727 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 RABIFP47224 123 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 LSSP48449 732 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 MMP16P51512 607 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 KPNA1P52294 538 aaPredicted RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 CYP27A1Q02318 531 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 GFPT1Q06210 699 aaPredicted RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 SMARCB1Q12824 385 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 MTF1Q14872 753 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 SLC18A3Q16572 532 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 DUSP6Q16828 381 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 ELMSAN1Q6PJG2 1045 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 SLC2A7Q6PXP3 512 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 USP45Q70EL2 814 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 VPS36Q86VN1 386 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 SPATA2LQ8IUW3 424 aaPredicted RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 ZMIZ2Q8NF64 920 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 CEP70Q8NHQ1 597 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 UBA3Q8TBC4 463 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 PTP4A1Q93096 173 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 KLHL5Q96PQ7 755 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 EIF3CQ99613 913 aaKnown RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 MED10Q9BTT4 135 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 DUSP16Q9BY84 665 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 ZNF518BQ9C0D4 1074 aa5.3□□□□□ -1.56
VCAM1-202ENST00000347652 UBE2ZQ9H832 354 aaPredicted RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 PTBP2Q9UKA9 531 aaKnown RBP5.3□□□□□ -1.56
VCAM1-202ENST00000347652 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.29□□□□□ -1.56
VCAM1-202ENST00000347652 MTMR11A4FU01 709 aa5.29□□□□□ -1.56
VCAM1-202ENST00000347652 SLC22A31A6NKX4 558 aa5.29□□□□□ -1.56
VCAM1-202ENST00000347652 H0YAE9 185 aa5.29□□□□□ -1.56
VCAM1-202ENST00000347652 M0QYV0 167 aa5.29□□□□□ -1.56
VCAM1-202ENST00000347652 ZNF263O14978 683 aa5.29□□□□□ -1.56
VCAM1-202ENST00000347652 ATP8B3O60423 1300 aa5.29□□□□□ -1.56
VCAM1-202ENST00000347652 NDUFA10O95299 355 aa5.29□□□□□ -1.56
VCAM1-202ENST00000347652 IFNB1P01574 187 aa5.29□□□□□ -1.56
VCAM1-202ENST00000347652 CPB1P15086 417 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms