RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CCDC167Q9P0B6 97 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 DAPK2Q9UIK4 370 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 RECQL5O94762 991 aaPredicted RBP23.37■■□□□ 1.33
NPAS3-201ENST00000346562 NOMO2Q5JPE7 1267 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 HYIQ5T013 277 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 WSCD1Q658N2 575 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 NEPROQ6NW34 567 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 SH3BP5LQ7L8J4 393 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 ZSCAN18Q8TBC5 510 aaPredicted RBP23.37■■□□□ 1.33
NPAS3-201ENST00000346562 IDI2Q9BXS1 227 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 ADAM28Q9UKQ2 775 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 USP32Q8NFA0 1604 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 SLC15A5A6NIM6 579 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 HDCP19113 662 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 STAT5AP42229 794 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 FAAP100Q0VG06 881 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 BTBD9Q96Q07 612 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 RPS6KA6Q9UK32 745 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 GSTK1Q9Y2Q3 226 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 LYVE1Q9Y5Y7 322 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 SLC28A1O00337 649 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 SSTR1P30872 391 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 ALG9Q9H6U8 611 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 MYRFQ9Y2G1 1151 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 ZNF510Q9Y2H8 683 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 FGF19O95750 216 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 MLYCDO95822 493 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 SLC12A3P55017 1021 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 TAB1Q15750 504 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 FKBP1CQ5VVH2 108 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 LLGL2Q6P1M3 1020 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 DENND1CQ8IV53 801 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 PNMA5Q96PV4 448 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.36■■□□□ 1.33
NPAS3-201ENST00000346562 SH3GLB1Q9Y371 365 aa23.36■■□□□ 1.33
NPAS3-201ENST00000346562 A0A0A0MRY4 1105 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 SNPHO15079 494 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 ASGR1P07306 291 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 CLCN5P51795 746 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 TOP3AQ13472 1001 aaPredicted RBP23.35■■□□□ 1.33
NPAS3-201ENST00000346562 KLHL17Q6TDP4 642 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 LRRC49Q8IUZ0 686 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 TEKT5Q96M29 485 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 SPATA13Q96N96 652 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 ANKRD27Q96NW4 1050 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.35■■□□□ 1.33
NPAS3-201ENST00000346562 LMTK2Q8IWU2 1503 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 TNFAIP8O95379 198 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 GLI1P08151 1106 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 MYBL2P10244 700 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 RARAP10276 462 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 PRKAG1P54619 331 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 MTAPQ13126 283 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 NDUFA5Q16718 116 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 KIAA0408Q6ZU52 694 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 R3HCC1LQ7Z5L2 792 aaKnown RBP23.35■■□□□ 1.33
NPAS3-201ENST00000346562 EXOC3L1Q86VI1 746 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 AADATQ8N5Z0 425 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 L2HGDHQ9H9P8 463 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 PTPRAP18433 802 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 KLHL23Q8NBE8 558 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 NELL1Q92832 810 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.35■■□□□ 1.33
NPAS3-201ENST00000346562 NRDE2Q9H7Z3 1164 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 TNS2Q63HR2 1409 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 UBA1P22314 1058 aaKnown RBP23.35■■□□□ 1.33
NPAS3-201ENST00000346562 PSMD4P55036 377 aaKnown RBP23.35■■□□□ 1.33
NPAS3-201ENST00000346562 CDK16Q00536 496 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 SLC34A1Q06495 639 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 ZSWIM7Q19AV6 140 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 GPAT3Q53EU6 434 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.35■■□□□ 1.33
NPAS3-201ENST00000346562 CCNDBP1O95273 360 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 CCNA2P20248 432 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 LRPAP1P30533 357 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 EPS8Q12929 822 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 TIMM50Q3ZCQ8 353 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 CHPFQ8IZ52 775 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 NMD3Q96D46 503 aaKnown RBP23.35■■□□□ 1.33
NPAS3-201ENST00000346562 ZBTB45Q96K62 511 aaPredicted RBP23.35■■□□□ 1.33
NPAS3-201ENST00000346562 IL25Q9H293 177 aa23.35■■□□□ 1.33
NPAS3-201ENST00000346562 ANKRD63C9JTQ0 380 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 TRUB2O95900 331 aaKnown RBP23.34■■□□□ 1.33
NPAS3-201ENST00000346562 EPORP19235 508 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 VGLL4Q14135 290 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 ZC3H12AQ5D1E8 599 aaKnown RBP23.34■■□□□ 1.33
NPAS3-201ENST00000346562 SLC41A1Q8IVJ1 513 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 DHRSXQ8N5I4 330 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 FUT8Q9BYC5 575 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 ASNA1O43681 348 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 HSPA14Q0VDF9 509 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 PFKFB4Q16877 469 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 IL17RBQ9NRM6 502 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 NUDT5Q9UKK9 219 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 VPS4AQ9UN37 437 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 PTPRMP28827 1452 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 ITGA2P17301 1181 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 PSMB4P28070 264 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 SPDYCQ5MJ68 293 aa23.34■■□□□ 1.33
NPAS3-201ENST00000346562 CYP2W1Q8TAV3 490 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms