RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ALDH1A2O94788 518 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 INHBAP08476 426 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 WNT3AP56704 352 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 NTHL1P78549 312 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 DSC2Q02487 901 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 NIPAL4Q0D2K0 466 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 CDH18Q13634 790 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 CRYMQ14894 314 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 CERCAMQ5T4B2 595 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 CCDC117Q8IWD4 279 aaPredicted RBP21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 DDI1Q8WTU0 396 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 MRGPRX2Q96LB1 330 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 TRIM56Q9BRZ2 755 aaKnown RBP21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 CAPS2Q9BXY5 557 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 MOCS1Q9NZB8 636 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 MIA3Q5JRA6 1907 aa21.8■■□□□ 1.08
TSPAN3-202ENST00000346495 FAM159BA6NKW6 160 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 KRT15P19012 456 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 CD86P42081 329 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 RANBP10Q6VN20 620 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 LRRC6Q86X45 466 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 CTAGE3PQ8IX95 158 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 ARRDC2Q8TBH0 407 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 TTC17Q96AE7 1141 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 TADA1Q96BN2 335 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 GDF15Q99988 308 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 SELENOSQ9BQE4 189 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 CINPQ9BW66 212 aaPredicted RBP21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 PIDD1Q9HB75 910 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 TDP1Q9NUW8 608 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 SENP1Q9P0U3 644 aa21.79■■□□□ 1.08
TSPAN3-202ENST00000346495 FAM237BA0A1B0GVD1 139 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 CBX4O00257 560 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 ATP9BO43861 1147 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 USP1O94782 785 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 CYBBP04839 570 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 MMP2P08253 660 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 ALG1LQ6GMV1 187 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 ZNF449Q6P9G9 518 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 TRMT10BQ6PF06 316 aaKnown RBP21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 TMEM135Q86UB9 458 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 TRABD2AQ86V40 505 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 SLC26A11Q86WA9 606 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 MFN1Q8IWA4 741 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 PPM1NQ8N819 430 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 USP13Q92995 863 aaPredicted RBP21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 MGME1Q9BQP7 344 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 ZNF180Q9UJW8 692 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 SOX13Q9UN79 622 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 CCL26Q9Y258 94 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 RPS6KL1Q9Y6S9 549 aa21.78■■□□□ 1.08
TSPAN3-202ENST00000346495 IQANK1A0A1B0GTG1 560 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 SHOX2O60902 331 aaPredicted RBP21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 PIAS1O75925 651 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 TPH1P17752 444 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 GLDCP23378 1020 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 MDH1P40925 334 aaKnown RBP21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 NRIP1P48552 1158 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 FRG1Q14331 258 aaKnown RBP21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 FSCBQ5H9T9 825 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 ARMC3Q5W041 872 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 DENND5AQ6IQ26 1287 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 SRRM1Q8IYB3 904 aaKnown RBP21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 GDPD5Q8WTR4 605 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 SMG7Q92540 1137 aaKnown RBP21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 CDKL2Q92772 493 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 PSKH2Q96QS6 385 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 SEMA3CQ99985 751 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 FEM1AQ9BSK4 669 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 SLC28A3Q9HAS3 691 aa21.77■■□□□ 1.08
TSPAN3-202ENST00000346495 CXorf49A8MYA2 514 aaPredicted RBP21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 PAPLNO95428 1278 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 TCF3P15923 654 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 MZF1P28698 734 aaPredicted RBP21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 NUMBP49757 651 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 NAB1Q13506 487 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 SLC14A2Q15849 920 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 PCSK7Q16549 785 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 PCID2Q5JVF3 399 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 POTEHQ6S545 545 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 ZNF669Q96BR6 464 aaPredicted RBP21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 CDCA3Q99618 268 aaPredicted RBP21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 ARNT2Q9HBZ2 717 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 SMYD2Q9NRG4 433 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 VPS28Q9UK41 221 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 MRPS23Q9Y3D9 190 aaKnown RBP21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 OR51B4Q9Y5P0 310 aa21.77■■□□□ 1.07
TSPAN3-202ENST00000346495 MUSKO15146 869 aa21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 BRAFP15056 766 aa21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 CSKP41240 450 aa21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 GNGT1P63211 74 aa21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 ARF5P84085 180 aa21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 ANKRD20A4Q4UJ75 823 aa21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 LGSNQ5TDP6 509 aa21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 RNF43Q68DV7 783 aa21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 TPGS1Q6ZTW0 290 aa21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 PTCD2Q8WV60 388 aaKnown RBP21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 KIFC1Q9BW19 673 aa21.76■■□□□ 1.07
TSPAN3-202ENST00000346495 SFXN1Q9H9B4 322 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms