RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 WASF2Q9Y6W5 498 aa14.72□□□□□ -0.05
HMGN3-202ENST00000344726 TBC1D3DA0A087WVF3 549 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TBC1D3IA0A087WXS9 549 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TBC1D3EA0A087X179 549 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TBC1D3KA0A087X1G2 549 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TBC1D3FA6NER0 549 aaPredicted RBP14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TBC1D3LB9A6J9 549 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 VILLO15195 856 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 SLC7A4O43246 635 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 GYPCP04921 128 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TBC1D3HP0C7X1 549 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 EPHB2P29323 1055 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 SLC20A2Q08357 652 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 SHBQ15464 509 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TEAD4Q15561 434 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 SKOR2Q2VWA4 1001 aaPredicted RBP14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TDRD12Q587J7 1177 aaKnown RBP14.71□□□□□ -0.05
HMGN3-202ENST00000344726 ARSIQ5FYB1 569 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TBC1D3GQ6DHY5 549 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TBC1D3CQ6IPX1 549 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 RAB44Q7Z6P3 723 aaPredicted RBP14.71□□□□□ -0.05
HMGN3-202ENST00000344726 SLCO6A1Q86UG4 719 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TBC1D3Q8IZP1 549 aaPredicted RBP14.71□□□□□ -0.05
HMGN3-202ENST00000344726 RTL3Q8N8U3 475 aaKnown RBP14.71□□□□□ -0.05
HMGN3-202ENST00000344726 TMIEQ8NEW7 156 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 GRIN3AQ8TCU5 1115 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 SETD7Q8WTS6 366 aaKnown RBP14.71□□□□□ -0.05
HMGN3-202ENST00000344726 SYN2Q92777 582 aaPredicted RBP14.71□□□□□ -0.05
HMGN3-202ENST00000344726 XPO4Q9C0E2 1151 aaKnown RBP14.71□□□□□ -0.05
HMGN3-202ENST00000344726 CEP44Q9C0F1 390 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 MAGEH1Q9H213 219 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 PCDHGB2Q9Y5G2 931 aa14.71□□□□□ -0.05
HMGN3-202ENST00000344726 LRRK1Q38SD2 2015 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 WASH4PA8MWX3 477 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 KPNA3O00505 521 aaPredicted RBP14.7□□□□□ -0.06
HMGN3-202ENST00000344726 RAMP2O60895 175 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 LEFTY1O75610 366 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 PROS1P07225 676 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 MAT2AP31153 395 aaKnown RBP14.7□□□□□ -0.06
HMGN3-202ENST00000344726 ETFBP38117 255 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 AIF1P55008 147 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 ZBED6P86452 979 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 HNRNPDQ14103 355 aaKnown RBP14.7□□□□□ -0.06
HMGN3-202ENST00000344726 POLD3Q15054 466 aaPredicted RBP14.7□□□□□ -0.06
HMGN3-202ENST00000344726 GLRX5Q86SX6 157 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 PCDH20Q8N6Y1 951 aaKnown RBP14.7□□□□□ -0.06
HMGN3-202ENST00000344726 FNIP1Q8TF40 1166 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 CCDC114Q96M63 670 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 EPAS1Q99814 870 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 SNRNP25Q9BV90 132 aaKnown RBP14.7□□□□□ -0.06
HMGN3-202ENST00000344726 TM6SF2Q9BZW4 377 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 KDM4CQ9H3R0 1056 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 MYO1AQ9UBC5 1043 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 IL36AQ9UHA7 158 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 PCSK1NQ9UHG2 260 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 AP4E1Q9UPM8 1137 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 CA5BQ9Y2D0 317 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 NEUROG3Q9Y4Z2 214 aa14.7□□□□□ -0.06
HMGN3-202ENST00000344726 SHROOM3Q8TF72 1996 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 A0A087X0T9 212 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 CXorf51AA0A1B0GTR3 108 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 FAM221BA6H8Z2 402 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 FLRT2O43155 660 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 KDELR3O43731 214 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 LRCH4O75427 683 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 PRNPP04156 253 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 SERPING1P05155 500 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 ATXN1LP0C7T5 689 aaKnown RBP14.69□□□□□ -0.06
HMGN3-202ENST00000344726 FAM228BP0C875 321 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 CD38P28907 300 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 MIPP30301 263 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 CASP14P31944 242 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 GKP32189 559 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 CCT8P50990 548 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 DNA2P51530 1060 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 CCNHP51946 323 aaPredicted RBP14.69□□□□□ -0.06
HMGN3-202ENST00000344726 CARD16Q5EG05 197 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 ADAT2Q7Z6V5 191 aaKnown RBP14.69□□□□□ -0.06
HMGN3-202ENST00000344726 TRIM69Q86WT6 500 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 SPATS2Q86XZ4 545 aaKnown RBP14.69□□□□□ -0.06
HMGN3-202ENST00000344726 NETO2Q8NC67 525 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 SLC39A7Q92504 469 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 ISG20Q96AZ6 181 aaKnown RBP14.69□□□□□ -0.06
HMGN3-202ENST00000344726 HMCESQ96FZ2 354 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 SERAC1Q96JX3 654 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 KCTD15Q96SI1 283 aaPredicted RBP14.69□□□□□ -0.06
HMGN3-202ENST00000344726 HEPHQ9BQS7 1158 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 CAAP1Q9H8G2 361 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 AASDHPPTQ9NRN7 309 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 PCDHB9Q9Y5E1 797 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 ZZEF1O43149 2961 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 FREM2Q5SZK8 3169 aa14.69□□□□□ -0.06
HMGN3-202ENST00000344726 PLXNB3Q9ULL4 1909 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 PTPRBP23467 1997 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 A0A1B0GTQ1 180 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 RASA4BC9J798 803 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 RASA4O43374 803 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 PCDHGA12O60330 932 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 DKK1O94907 266 aa14.68□□□□□ -0.06
HMGN3-202ENST00000344726 MYBL1P10243 752 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms