RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ABL2P42684 1182 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 CDH4P55283 916 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 ANKS6Q68DC2 871 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 DAW1Q8N136 415 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 EPS8L3Q8TE67 593 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 HEXDCQ8WVB3 486 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 PCYT2Q99447 389 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 LPIN3Q9BQK8 851 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 C17orf80Q9BSJ5 609 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 hCG_1818297A0A087WSY0 165 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 FGF1P05230 155 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 CTPS1P17812 591 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 GJA8P48165 433 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 GRM2Q14416 872 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 CYP2A13Q16696 494 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 CDCA2Q69YH5 1023 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 PRPF39Q86UA1 669 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 FBXO39Q8N4B4 442 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 CYP4F12Q9HCS2 524 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 CHST7Q9NS84 486 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 A0A087X1B8 175 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 A0A088AWK7 358 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 C1orf232A0A0U1RR37 186 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 SLC31A1O15431 190 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 FTH1P02794 183 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 ELFN1P0C7U0 828 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 ZNF10P21506 573 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 DDX6P26196 483 aaKnown RBP eCLIP16.6■□□□□ 0.254e-6■□□□□ 11.1
SMARCA4-201ENST00000344626 MAT2AP31153 395 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 RFX3P48380 749 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 NCALDP61601 193 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 CDK18Q07002 472 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 TRIP4Q15650 581 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 ZNF655Q8N720 491 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 BPIFB1Q8TDL5 484 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 FEM1CQ96JP0 617 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 DZANK1Q9NVP4 752 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 LRRC72A6NJI9 287 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 HLA-DPA1P20036 260 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 PLEKHA7Q6IQ23 1121 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 ZCCHC9Q8N567 271 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 RPL10LQ96L21 214 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 KANSL1LA0AUZ9 987 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 STX5Q13190 355 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 LINGO4Q6UY18 593 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 PATL1Q86TB9 770 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 KLHL5Q96PQ7 755 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 BCO2Q9BYV7 579 aa16.6■□□□□ 0.25
SMARCA4-201ENST00000344626 GRXCR1A8MXD5 290 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 KATNA1O75449 491 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 PRNPP04156 253 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 ZNF662Q6ZS27 426 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 RGS9BPQ6ZS82 235 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 SLC22A17Q8WUG5 538 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 RHOBTB2Q9BYZ6 727 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 PCDH18Q9HCL0 1135 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 DNAJC25-GNG10A0A024R161 153 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 GNG14A0A1W2PPG7 69 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 CFAP73A6NFT4 308 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 TBX18O95935 607 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 ENO3P13929 434 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 PTPN9P43378 593 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 RPL21P46778 160 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 IL2P60568 153 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 ELP6Q0PNE2 266 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 ZCWPW2Q504Y3 356 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 JOSD2Q8TAC2 188 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 FAM126AQ9BYI3 521 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 A0A1B0GVM2 712 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 TCAF2A6NFQ2 919 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 LPOP22079 712 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 UAP1L1Q3KQV9 507 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 OR52K1Q8NGK4 314 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 GMEB2Q9UKD1 530 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 TMCO1Q9UM00 188 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 E9PAM4 449 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 GUCA1CO95843 209 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 CHRNA1P02708 482 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 PGM1P36871 562 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 SKOR1P84550 965 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 SPIRE1Q08AE8 756 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 PDCD2Q16342 344 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 SNAP47Q5SQN1 464 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 PMF1Q6P1K2 205 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 CMTR2Q8IYT2 770 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 ALLCQ8N6M5 410 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 ATL1Q8WXF7 558 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 ELMO1Q92556 727 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 TDP1Q9NUW8 608 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 PCDHA11Q9Y5I1 949 aa16.59■□□□□ 0.25
SMARCA4-201ENST00000344626 C4AP0C0L4 1744 aa16.58■□□□□ 0.25
SMARCA4-201ENST00000344626 KCNE1P15382 129 aa16.58■□□□□ 0.25
SMARCA4-201ENST00000344626 MAPKAPK2P49137 400 aa16.58■□□□□ 0.25
SMARCA4-201ENST00000344626 PRIM2P49643 509 aa16.58■□□□□ 0.25
SMARCA4-201ENST00000344626 PDGFRLQ15198 375 aa16.58■□□□□ 0.25
SMARCA4-201ENST00000344626 TEAD2Q15562 447 aa16.58■□□□□ 0.25
SMARCA4-201ENST00000344626 ARID3BQ8IVW6 561 aaPredicted RBP16.58■□□□□ 0.25
SMARCA4-201ENST00000344626 NKAPQ8N5F7 415 aaKnown RBP16.58■□□□□ 0.25
SMARCA4-201ENST00000344626 NDEL1Q9GZM8 345 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms