RNA–Protein interactions for RNA: ENST00000344576.6

EGFR-203, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-203ENST00000344576 GMPR2Q9P2T1 348 aaKnown RBP16.33■□□□□ 0.21
EGFR-203ENST00000344576 EBF1Q9UH73 591 aa16.33■□□□□ 0.21
EGFR-203ENST00000344576 BARX2Q9UMQ3 279 aaPredicted RBP16.33■□□□□ 0.21
EGFR-203ENST00000344576 NME7Q9Y5B8 376 aa16.33■□□□□ 0.21
EGFR-203ENST00000344576 COPG1Q9Y678 874 aaKnown RBP16.33■□□□□ 0.21
EGFR-203ENST00000344576 TCAF2A6NFQ2 919 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 MANSC4A6NHS7 340 aaPredicted RBP16.33■□□□□ 0.2
EGFR-203ENST00000344576 KCNU1A8MYU2 1149 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 PHGDHO43175 533 aaKnown RBP16.33■□□□□ 0.2
EGFR-203ENST00000344576 POLBP06746 335 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 SBK3P0C264 359 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 MLNP12872 115 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 TFEBP19484 476 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 RPL14P50914 215 aaKnown RBP16.33■□□□□ 0.2
EGFR-203ENST00000344576 LIMK2P53671 638 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 IKBKEQ14164 716 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 ITPRIPL1Q6GPH6 555 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 C4orf22Q6V702 233 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 CYP2R1Q6VVX0 501 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 CLEC14AQ86T13 490 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 CCNYQ8ND76 341 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 APOL2Q9BQE5 337 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 TRPV6Q9H1D0 765 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 OXSMQ9NWU1 459 aa16.33■□□□□ 0.2
EGFR-203ENST00000344576 FAF1Q9UNN5 650 aaPredicted RBP16.33■□□□□ 0.2
EGFR-203ENST00000344576 TRIP12Q14669 1992 aaPredicted RBP16.32■□□□□ 0.2
EGFR-203ENST00000344576 TMEM114B3SHH9 223 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 KCNK1O00180 336 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 CCDC130P13994 396 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 PTK2BQ14289 1009 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 SOWAHAQ2M3V2 549 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 GRTP1Q5TC63 336 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 FAM131BQ86XD5 332 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 ERI1Q8IV48 349 aaKnown RBP16.32■□□□□ 0.2
EGFR-203ENST00000344576 SPATA6LQ8N4H0 392 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 DNAJB3Q8WWF6 145 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 LZICQ8WZA0 190 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 EIF2AQ9BY44 585 aaKnown RBP16.32■□□□□ 0.2
EGFR-203ENST00000344576 ACE2Q9BYF1 805 aaPredicted RBP16.32■□□□□ 0.2
EGFR-203ENST00000344576 TASP1Q9H6P5 420 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 OLAHQ9NV23 265 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 FIS1Q9Y3D6 152 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 TANC1Q9C0D5 1861 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 SHROOM3Q8TF72 1996 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 SYNJ2BP-COX16A0A087WUM0 186 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 KPNA7A9QM74 516 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 TREHO43280 583 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 CAPNS1P04632 268 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 ALDH3B2P48448 385 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 CDK9P50750 372 aaKnown RBP16.32■□□□□ 0.2
EGFR-203ENST00000344576 CAP1Q01518 475 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 NSUN2Q08J23 767 aaKnown RBP eCLIP16.32■□□□□ 0.2
EGFR-203ENST00000344576 SLC10A6Q3KNW5 377 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 GLRA4Q5JXX5 417 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 TMEM126BQ8IUX1 230 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 ZNF567Q8N184 647 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 TMEM40Q8WWA1 233 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 ZBTB26Q9HCK0 441 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 COX16Q9P0S2 106 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 RAP2CQ9Y3L5 183 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 SNX13Q9Y5W8 968 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 NUP205Q92621 2012 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 FAM155AB1AL88 458 aaPredicted RBP16.32■□□□□ 0.2
EGFR-203ENST00000344576 H6PDO95479 791 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 SLC10A3P09131 477 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 CKMT2P17540 419 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 VARSP26640 1264 aaKnown RBP16.32■□□□□ 0.2
EGFR-203ENST00000344576 HSPA13P48723 471 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 C16orf72Q14CZ0 275 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 CARM1Q86X55 608 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 NDRG1Q92597 394 aaKnown RBP16.32■□□□□ 0.2
EGFR-203ENST00000344576 VPS28Q9UK41 221 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 SLC39A10Q9ULF5 831 aa16.32■□□□□ 0.2
EGFR-203ENST00000344576 C9IYK1 514 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 E7ENX8 843 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 H3BNH8 94 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 SPRP35270 261 aaPredicted RBP16.31■□□□□ 0.2
EGFR-203ENST00000344576 PRAMEP78395 509 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 TRIM32Q13049 653 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 ZNF460Q14592 562 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 MFSD10Q14728 455 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 ELMSAN1Q6PJG2 1045 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 LSMEM2Q8N112 164 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 SLCO4A1Q96BD0 722 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 RANBP9Q96S59 729 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 APBA2Q99767 749 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 MRPL45Q9BRJ2 306 aaKnown RBP16.31■□□□□ 0.2
EGFR-203ENST00000344576 RRN3Q9NYV6 651 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 USP3Q9Y6I4 520 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 F2P00734 622 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 CYP2C9P11712 490 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 HOXD8P13378 290 aaPredicted RBP16.31■□□□□ 0.2
EGFR-203ENST00000344576 NR2C2P49116 596 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 PSMD7P51665 324 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 HMBOX1Q6NT76 420 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 TMEM151AQ8N4L1 468 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 DLG3Q92796 817 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 ZNF597Q96LX8 424 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 NT5C1AQ9BXI3 368 aa16.31■□□□□ 0.2
EGFR-203ENST00000344576 EFCAB1Q9HAE3 211 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms