RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 FTH1P19P0C7X4 201 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 GOT1P17174 413 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 ETFBP38117 255 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 MAGEA1P43355 309 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 SLC25A11Q02978 314 aaKnown RBP18.39■□□□□ 0.53
USF2-202ENST00000343550 SLC20A2Q08357 652 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 KIF19Q2TAC6 998 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 SMTNL2Q2TAL5 461 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 PPP6R3Q5H9R7 873 aaPredicted RBP18.39■□□□□ 0.53
USF2-202ENST00000343550 LINGO4Q6UY18 593 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 GLRX5Q86SX6 157 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 TMTC1Q8IUR5 882 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 UMODL1-AS1Q8N2C9 162 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 PNPLA1Q8N8W4 532 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 ATP11CQ8NB49 1132 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 ADAMTS14Q8WXS8 1223 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 TM9SF3Q9HD45 589 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 CWC15Q9P013 229 aaKnown RBP18.39■□□□□ 0.53
USF2-202ENST00000343550 IMPACTQ9P2X3 320 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 NCKAP1Q9Y2A7 1128 aa18.39■□□□□ 0.53
USF2-202ENST00000343550 ZZEF1O43149 2961 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 CHD5Q8TDI0 1954 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 CHD6Q8TD26 2715 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 CXorf51AA0A1B0GTR3 108 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 SMAD6O43541 496 aaKnown RBP18.38■□□□□ 0.53
USF2-202ENST00000343550 FSBPO95073 299 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 CD160O95971 181 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 CD27P26842 260 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 ZNF135P52742 658 aaPredicted RBP18.38■□□□□ 0.53
USF2-202ENST00000343550 YBEYP58557 167 aaPredicted RBP18.38■□□□□ 0.53
USF2-202ENST00000343550 ARF5P84085 180 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 TCEAL1Q15170 157 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 TEAD4Q15561 434 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 DPYSL2Q16555 572 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 RETSATQ6NUM9 610 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 DBX2Q6ZNG2 339 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 RFX8Q6ZV50 586 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 USP30Q70CQ3 517 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 CPNE8Q86YQ8 564 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 RHOT2Q8IXI1 618 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 STK40Q8N2I9 435 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 TEKT4Q8WW24 435 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 HSPH1Q92598 858 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 PABPC3Q9H361 631 aaKnown RBP18.38■□□□□ 0.53
USF2-202ENST00000343550 LCMT1Q9UIC8 334 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 RALYQ9UKM9 306 aaKnown RBP18.38■□□□□ 0.53
USF2-202ENST00000343550 SCML1Q9UN30 329 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 APOBEC2Q9Y235 224 aaKnown RBP18.38■□□□□ 0.53
USF2-202ENST00000343550 PCDHGB2Q9Y5G2 931 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 SNX11Q9Y5W9 270 aa18.38■□□□□ 0.53
USF2-202ENST00000343550 EPN1Q9Y6I3 576 aaPredicted RBP18.38■□□□□ 0.53
USF2-202ENST00000343550 IGF2RP11717 2491 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 NUMA1Q14980 2115 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 SRRM3A6NNA2 597 aaPredicted RBP18.37■□□□□ 0.53
USF2-202ENST00000343550 DAPK3O43293 454 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 KDELR3O43731 214 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 RNASEH1O60930 286 aaKnown RBP18.37■□□□□ 0.53
USF2-202ENST00000343550 MTA2O94776 668 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 CYLC1P35663 651 aaPredicted RBP18.37■□□□□ 0.53
USF2-202ENST00000343550 GRIA4P48058 902 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 HADHQ16836 314 aaKnown RBP18.37■□□□□ 0.53
USF2-202ENST00000343550 MMAAQ8IVH4 418 aaKnown RBP18.37■□□□□ 0.53
USF2-202ENST00000343550 SPC24Q8NBT2 197 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 GANCQ8TET4 914 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 FBXL12Q9NXK8 326 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 DONSONQ9NYP3 566 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 HPCAL4Q9UM19 191 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 ANKRD6Q9Y2G4 727 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 PCDHA13Q9Y5I0 950 aa18.37■□□□□ 0.53
USF2-202ENST00000343550 SOWAHDA6NJG2 315 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 ZNF821O75541 412 aaPredicted RBP18.36■□□□□ 0.53
USF2-202ENST00000343550 ERCC2P18074 760 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 ARHGAP25P42331 645 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 SSR1P43307 286 aaKnown RBP18.36■□□□□ 0.53
USF2-202ENST00000343550 CLCN6P51797 869 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 SFSWAPQ12872 951 aaKnown RBP18.36■□□□□ 0.53
USF2-202ENST00000343550 ELAVL3Q14576 367 aaKnown RBP18.36■□□□□ 0.53
USF2-202ENST00000343550 MESDQ14696 234 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 SUZ12Q15022 739 aaKnown RBP18.36■□□□□ 0.53
USF2-202ENST00000343550 SPA17Q15506 151 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 ATP13A4Q4VNC1 1196 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 Q6ZVU0 165 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 POLNQ7Z5Q5 900 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 SLCO6A1Q86UG4 719 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 RFFLQ8WZ73 363 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 KLC2Q9H0B6 622 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.36■□□□□ 0.53
USF2-202ENST00000343550 ACTL7AQ9Y615 435 aa18.36■□□□□ 0.53
USF2-202ENST00000343550 FAM47DPA6NHR8 397 aa18.35■□□□□ 0.53
USF2-202ENST00000343550 RASA4BC9J798 803 aa18.35■□□□□ 0.53
USF2-202ENST00000343550 MCF2LO15068 1137 aa18.35■□□□□ 0.53
USF2-202ENST00000343550 FLRT2O43155 660 aa18.35■□□□□ 0.53
USF2-202ENST00000343550 RASA4O43374 803 aa18.35■□□□□ 0.53
USF2-202ENST00000343550 NDUFA10O95299 355 aa18.35■□□□□ 0.53
USF2-202ENST00000343550 IGHV4-34P06331 123 aa18.35■□□□□ 0.53
USF2-202ENST00000343550 SLC8A1P32418 973 aa18.35■□□□□ 0.53
USF2-202ENST00000343550 MAN1A1P33908 653 aa18.35■□□□□ 0.53
USF2-202ENST00000343550 SERPINH1P50454 418 aaKnown RBP18.35■□□□□ 0.53
USF2-202ENST00000343550 NDST2P52849 883 aa18.35■□□□□ 0.53
USF2-202ENST00000343550 TAS2R40P59535 323 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms