RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CFAP52Q8N1V2 620 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 ZNF689Q96CS4 500 aaPredicted RBP18.88■□□□□ 0.61
HOXA9-201ENST00000343483 ZNF212Q9UDV6 495 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 HAO1Q9UJM8 370 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 COL4A6Q14031 1691 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 A0A0G2JND7 137 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 GOLGA8TH3BQL2 631 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 COCHO43405 550 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 ABLIM3O94929 683 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 HMGA1P17096 107 aaKnown RBP18.88■□□□□ 0.61
HOXA9-201ENST00000343483 DNAJB2P25686 324 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 HARS2P49590 506 aaKnown RBP18.88■□□□□ 0.61
HOXA9-201ENST00000343483 FRG1Q14331 258 aaKnown RBP18.88■□□□□ 0.61
HOXA9-201ENST00000343483 TAF1BQ53T94 588 aaPredicted RBP18.88■□□□□ 0.61
HOXA9-201ENST00000343483 SWT1Q5T5J6 900 aaKnown RBP18.88■□□□□ 0.61
HOXA9-201ENST00000343483 GRTP1Q5TC63 336 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 DENND5AQ6IQ26 1287 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 MTDHQ86UE4 582 aaKnown RBP18.88■□□□□ 0.61
HOXA9-201ENST00000343483 NSMCE1Q8WV22 266 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 MECRQ9BV79 373 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 KIFC1Q9BW19 673 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 ENTPD7Q9NQZ7 604 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 YIPF1Q9Y548 306 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 ADRA1AP35348 466 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 MTA1Q13330 715 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 PLD1Q13393 1074 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 PARP15Q460N3 678 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 PCID2Q5JVF3 399 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 TEDDM1Q5T9Z0 273 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 AUTS2Q8WXX7 1259 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 OVCA2Q8WZ82 227 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 AZIN2Q96A70 460 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 MRGPRX2Q96LB1 330 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 RAB3IPQ96QF0 476 aaPredicted RBP18.87■□□□□ 0.61
HOXA9-201ENST00000343483 SLC25A51Q9H1U9 297 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 LRMDAQ9H2I8 198 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 IARS2Q9NSE4 1012 aaKnown RBP18.87■□□□□ 0.61
HOXA9-201ENST00000343483 TRPM5Q9NZQ8 1165 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 GREB1Q4ZG55 1949 aa18.87■□□□□ 0.61
HOXA9-201ENST00000343483 PRRG1O14668 218 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 KLF11O14901 512 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 TGDSO95455 350 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 URODP06132 367 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 SLC6A4P31645 630 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 SLC8A1P32418 973 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 ETFBP38117 255 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 SLC11A2P49281 568 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 ARFIP2P53365 341 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 WNT3AP56704 352 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 PDE1CQ14123 709 aaPredicted RBP18.86■□□□□ 0.61
HOXA9-201ENST00000343483 SPDYAQ5MJ70 313 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 TPGS2Q68CL5 300 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 TRIM42Q8IWZ5 723 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 PPHLN1Q8NEY8 458 aaKnown RBP18.86■□□□□ 0.61
HOXA9-201ENST00000343483 ACMSDQ8TDX5 336 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 TMEM237Q96Q45 408 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 RBBP8Q99708 897 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 ACSL4O60488 711 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 SPRP35270 261 aaPredicted RBP18.86■□□□□ 0.61
HOXA9-201ENST00000343483 ACVRL1P37023 503 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 CD86P42081 329 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 CHRNA4P43681 627 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 ABCG1P45844 678 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 MAPKAPK2P49137 400 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 WDR5P61964 334 aaKnown RBP18.86■□□□□ 0.61
HOXA9-201ENST00000343483 MPP3Q13368 585 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 SERINC3Q13530 473 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 SNX30Q5VWJ9 437 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 PKN3Q6P5Z2 889 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 DENND1CQ8IV53 801 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 ATP2A3Q93084 1043 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 FATE1Q969F0 183 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 IMP4Q96G21 291 aaKnown RBP18.86■□□□□ 0.61
HOXA9-201ENST00000343483 HTATIP2Q9BUP3 242 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 RC3H2Q9HBD1 1191 aaKnown RBP18.86■□□□□ 0.61
HOXA9-201ENST00000343483 SPG21Q9NZD8 308 aa18.86■□□□□ 0.61
HOXA9-201ENST00000343483 A8MUI8 341 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 CBX6O95503 412 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 IL1BP01584 269 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 T-ENOLP0DO92 83 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 ACRP10323 421 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 LAG3P18627 525 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 TYK2P29597 1187 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 GTF2A1P52655 376 aaPredicted RBP18.85■□□□□ 0.61
HOXA9-201ENST00000343483 IRX4P78413 519 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 DSC2Q02487 901 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 VEPH1Q14D04 833 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 SLC25A41Q8N5S1 370 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 HERC2P3Q9BVR0 1158 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 TMEM120AQ9BXJ8 343 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 HSFX1Q9UBD0 423 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 MTO1Q9Y2Z2 717 aaKnown RBP18.85■□□□□ 0.61
HOXA9-201ENST00000343483 CCDC195A0A1B0GUA6 201 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 TTC24A2A3L6 582 aaPredicted RBP18.85■□□□□ 0.61
HOXA9-201ENST00000343483 TRIM43BA6NCK2 446 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 TIMP1P01033 207 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 LIMK2P53671 638 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 IL10RBQ08334 325 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 SEPT6Q14141 434 aa18.85■□□□□ 0.61
HOXA9-201ENST00000343483 PPM1JQ5JR12 505 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms