RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 RBM47A0AV96 593 aaKnown RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 ETS1P14921 441 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 RRM1P23921 792 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 DSG3P32926 999 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 GRK5P34947 590 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 LIN52Q52LA3 116 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ELOA2Q8IYF1 753 aaPredicted RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 CFAP206Q8IYR0 622 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ADAM32Q8TC27 787 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 GANCQ8TET4 914 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 SERAC1Q96JX3 654 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PHF20Q9BVI0 1012 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 CCDC106Q9BWC9 280 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 TAS2R7Q9NYW3 318 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 CFAP97Q9P2B7 532 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 INVSQ9Y283 1065 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 DNAJC16Q9Y2G8 782 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 IFT172Q9UG01 1749 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 LRRC14BA6NHZ5 514 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 RORCP51449 518 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 NME5P56597 212 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 NAPEPLDQ6IQ20 393 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 C3orf33Q6P1S2 294 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 KLHDC10Q6PID8 442 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 SMIM15Q7Z3B0 74 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ZNF677Q86XU0 584 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ASCC1Q8N9N2 400 aaKnown RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 REPS1Q96D71 796 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 CPNE1Q99829 537 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 COPS4Q9BT78 406 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 KANSL2Q9H9L4 492 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PTCH1Q13635 1447 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 IL18RAPO95256 599 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PRAMEF1O95521 474 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 FADS2O95864 444 aaKnown RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 ANXA1P04083 346 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ECHS1P30084 290 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 TGM3Q08188 693 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 FAM187BQ17R55 369 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 FOXR1Q6PIV2 292 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 TMPRSS11AQ6ZMR5 421 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ZZZ3Q8IYH5 903 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ARMC10Q8N2F6 343 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 LIN37Q96GY3 246 aaPredicted RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 CRISPLD1Q9H336 500 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 KCND2Q9NZV8 630 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ADD3Q9UEY8 706 aaKnown RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 NCKAP1Q9Y2A7 1128 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 LRRK1Q38SD2 2015 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 DISC1C4P0D8 188 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 IFRD1O00458 451 aaPredicted RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 AP5Z1O43299 807 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PLIN3O60664 434 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ALDH1A2O94788 518 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PRR29P0C7W0 189 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 IL32P24001 234 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 DCKP27707 260 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 CD83Q01151 205 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 RPA4Q13156 261 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PPP1R15BQ5SWA1 713 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 TTI2Q6NXR4 508 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 SLC26A11Q86WA9 606 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 TBC1D21Q8IYX1 336 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 OFCC1Q8IZS5 231 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 RAD54LQ92698 747 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 KCTD15Q96SI1 283 aaPredicted RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 TSNAXQ99598 290 aaKnown RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 OXCT2Q9BYC2 517 aaPredicted RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 TOPORSQ9NS56 1045 aaPredicted RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 CCDC167Q9P0B6 97 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 HMGXB4Q9UGU5 601 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 EVLQ9UI08 416 aaPredicted RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 PRPF19Q9UMS4 504 aaKnown RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 DOLKQ9UPQ8 538 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 C2orf81A6NN90 581 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 DDX3YO15523 660 aaKnown RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 MAFKO60675 156 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 SRGNP10124 158 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 TIE1P35590 1138 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 AVPR1AP37288 418 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 MYBPC1Q00872 1141 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PLEKHG6Q3KR16 790 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 DPPA2Q7Z7J5 298 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 MB21D2Q8IYB1 491 aaPredicted RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 NSUN6Q8TEA1 469 aaKnown RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 TCF12Q99081 682 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ZNF416Q9BWM5 594 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 SLC7A5P2Q9GIP4 190 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 FANCFQ9NPI8 374 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 FLT1P17948 1338 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 EMSYQ7Z589 1322 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 KCNA5P22460 613 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 PTENP60484 403 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ELP6Q0PNE2 266 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 TTMPQ5BVD1 217 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 CHRDL2Q6WN34 429 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 MTSS1LQ765P7 747 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 FOXP4Q8IVH2 680 aaPredicted RBP6.23□□□□□ -1.41
VCAN-203ENST00000343200 FAM47BQ8NA70 645 aa6.23□□□□□ -1.41
VCAN-203ENST00000343200 ATL1Q8WXF7 558 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms