RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 VGLL2Q8N8G2 317 aa15.18■□□□□ 0.02
UBE3B-202ENST00000342494 CCDC167Q9P0B6 97 aa15.18■□□□□ 0.02
UBE3B-202ENST00000342494 ARIH1Q9Y4X5 557 aaPredicted RBP15.18■□□□□ 0.02
UBE3B-202ENST00000342494 FAM25AB3EWG3 89 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 FAM25CB3EWG5 89 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 FAM25GB3EWG6 89 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 NEDD8-MDP1E9PL57 170 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 FAM20BO75063 409 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 HNF4AP41235 474 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 LYPLAL1Q5VWZ2 237 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 BNIPLQ7Z465 357 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 KLHL23Q8NBE8 558 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 OR10G6Q8NH81 332 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 MOSPD2Q8NHP6 518 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 UGT2B28Q9BY64 529 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 FBXO6Q9NRD1 293 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-202ENST00000342494 AGO1Q9UL18 857 aaKnown RBP15.17■□□□□ 0.02
UBE3B-202ENST00000342494 A0A087X0B3 334 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 MAGEC1O60732 1142 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 ATP9AO75110 1047 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 CALCAP01258 141 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 HLA-DQA2P01906 255 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 ABCG1P45844 678 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 MRPS35P82673 323 aaKnown RBP15.17■□□□□ 0.02
UBE3B-202ENST00000342494 CDK16Q00536 496 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 STX4Q12846 297 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 TOP6BLQ8N6T0 577 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 MCCC1Q96RQ3 725 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-202ENST00000342494 S100A13Q99584 98 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 INVSQ9Y283 1065 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 CYP3A7-CYP3A51PA0A087WV96 503 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 SMIM35A0A1B0GVV1 85 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 CLDN5O00501 218 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 CYP3A7P24462 503 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 TM4SF1P30408 202 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 CASP5P51878 434 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 FAM35AQ86V20 835 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 CCDC103Q8IW40 242 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 CPA6Q8N4T0 437 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 LRRC52Q8N7C0 313 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 SMG7Q92540 1137 aaKnown RBP15.17■□□□□ 0.02
UBE3B-202ENST00000342494 CHST7Q9NS84 486 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 H0YC42 278 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 DLGAP3O95886 979 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 APODP05090 189 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 KELP23276 732 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 RGS1Q08116 209 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 ALG11Q2TAA5 492 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 DGKKQ5KSL6 1271 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 SPPL2BQ8TCT7 592 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 BTBD9Q96Q07 612 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 RNPEPQ9H4A4 650 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 NOD2Q9HC29 1040 aa15.17■□□□□ 0.02
UBE3B-202ENST00000342494 C15orf38-AP3S2A0A0A6YYH1 394 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 KRT33AO76009 404 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 ELFN1P0C7U0 828 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 CRATP43155 626 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 FAM187BQ17R55 369 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 ATAT1Q5SQI0 421 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 RNF44Q7L0R7 432 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 ARPINQ7Z6K5 226 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 RNF145Q96MT1 663 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 FERD3LQ96RJ6 166 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 TSPAN18Q96SJ8 248 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 NXF3Q9H4D5 531 aaKnown RBP15.16■□□□□ 0.02
UBE3B-202ENST00000342494 BTBD7Q9P203 1132 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 KIAA1522Q9P206 1035 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-202ENST00000342494 CFAP97Q9P2B7 532 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 CTPS1P17812 591 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 NEK3P51956 506 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 DUSP4Q13115 394 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 PAGE2Q7Z2X7 111 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 MON1AQ86VX9 555 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 HAS1Q92839 578 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 CAPNS2Q96L46 248 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 KLHL1Q9NR64 748 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 VPS45Q9NRW7 570 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 SLC12A4Q9UP95 1085 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 ADGRA3Q8IWK6 1321 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 BTBD19C9JJ37 291 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 CHADO15335 359 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 CCDC166P0CW27 439 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 MAGEA10P43363 369 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-202ENST00000342494 CSNK2BP67870 215 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 SMARCB1Q12824 385 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 EEF1DP3Q658K8 133 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 PARGQ86W56 976 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 ETNPPLQ8TBG4 499 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 TBCDQ9BTW9 1192 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 NRDE2Q9H7Z3 1164 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 ANXA6P08133 673 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 MMP3P08254 477 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 SULT2A1Q06520 285 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 ABRQ12979 859 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 ZCCHC23Q6ZST2 131 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 OTOP2Q7RTS6 562 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 FBXO22Q8NEZ5 403 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 SLC39A8Q9C0K1 460 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 SERHL2Q9H4I8 314 aa15.16■□□□□ 0.02
UBE3B-202ENST00000342494 SERHLQ9NQF3 203 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms