RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 EFHD1Q9BUP0 239 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 RNF26Q9BY78 433 aaPredicted RBP11.51□□□□□ -0.57
ATXN3-201ENST00000340660 ZNF518BQ9C0D4 1074 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 MRPL18Q9H0U6 180 aaKnown RBP11.51□□□□□ -0.57
ATXN3-201ENST00000340660 AKTIPQ9H8T0 292 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 MLXIPLQ9NP71 852 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 CHST11Q9NPF2 352 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 ABCB8Q9NUT2 735 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 IL37Q9NZH6 218 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 CDH9Q9ULB4 789 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 NAP1L2Q9ULW6 460 aaPredicted RBP11.51□□□□□ -0.57
ATXN3-201ENST00000340660 ABCA4P78363 2273 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 CCDC196A0A1B0GTZ2 297 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 FAM92AA1XBS5 289 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 F8W735 103 aaPredicted RBP11.5□□□□□ -0.57
ATXN3-201ENST00000340660 HIP1RO75146 1068 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 ALX3O95076 343 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 HOXD9P28356 352 aaPredicted RBP11.5□□□□□ -0.57
ATXN3-201ENST00000340660 POLR2BP30876 1174 aaKnown RBP11.5□□□□□ -0.57
ATXN3-201ENST00000340660 CHKAP35790 457 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 PNPLA4P41247 253 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 EXOSC10Q01780 885 aaKnown RBP11.5□□□□□ -0.57
ATXN3-201ENST00000340660 CDK18Q07002 472 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 MAPK7Q13164 816 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 C1orf61Q13536 156 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 MAPRE1Q15691 268 aaKnown RBP11.5□□□□□ -0.57
ATXN3-201ENST00000340660 MDH1BQ5I0G3 518 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 ADAMTSL4Q6UY14 1074 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 PARS2Q7L3T8 475 aaKnown RBP11.5□□□□□ -0.57
ATXN3-201ENST00000340660 RBFAQ8N0V3 343 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 TOP6BLQ8N6T0 577 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 TMEM161BQ8NDZ6 487 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 MYCBPAPQ8TBZ2 947 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 CENPTQ96BT3 561 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 C14orf79Q96F83 325 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 SPRY4Q9C004 299 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 TCEAL2Q9H3H9 227 aaPredicted RBP11.5□□□□□ -0.57
ATXN3-201ENST00000340660 OSER1Q9NX31 292 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 RCOR3Q9P2K3 495 aaPredicted RBP11.5□□□□□ -0.57
ATXN3-201ENST00000340660 POLHQ9Y253 713 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 SNX9Q9Y5X1 595 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 NOTCH1P46531 2555 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 UNC13CQ8NB66 2214 aa11.5□□□□□ -0.57
ATXN3-201ENST00000340660 TGP01266 2768 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 ZSCAN5CA6NGD5 496 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 PDGFRBP09619 1106 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 PTPN1P18031 435 aaKnown RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 F8A1P23610 371 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 CDC25AP30304 524 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 ATP5C1P36542 298 aaKnown RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 TXKP42681 527 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 SLC5A3P53794 718 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 ADKP55263 362 aaKnown RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 TPRG1LQ5T0D9 272 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 TTC39BQ5VTQ0 682 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 ESRP1Q6NXG1 681 aaKnown RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 PTAR1Q7Z6K3 402 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 BIVMQ86UB2 503 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 PARGQ86W56 976 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 CCNJLQ8IV13 435 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 NLGN4XQ8N0W4 816 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 CHDHQ8NE62 594 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 NLGN4YQ8NFZ3 816 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 DDI1Q8WTU0 396 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 ITLN2Q8WWU7 325 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 KCNK16Q96T55 309 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 BHMT2Q9H2M3 363 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 ASB7Q9H672 318 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 MCCC2Q9HCC0 563 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 ZFP64Q9NPA5 681 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 MRPL40Q9NQ50 206 aaKnown RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 GDAP2Q9NXN4 497 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 ORC3Q9UBD5 711 aaPredicted RBP11.49□□□□□ -0.57
ATXN3-201ENST00000340660 GULP1Q9UBP9 304 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 GGA2Q9UJY4 613 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 NUDT5Q9UKK9 219 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 NAALADL1Q9UQQ1 740 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 NME7Q9Y5B8 376 aa11.49□□□□□ -0.57
ATXN3-201ENST00000340660 SPTY2D1-AS1A0A0U1RR47 76 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 LMO7DNF2Z398 122 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 CLDN5O00501 218 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 SLC27A2O14975 620 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 YY2O15391 372 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 KCNN4O15554 427 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 CYBBP04839 570 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 ATP5BP06576 529 aaKnown RBP11.48□□□□□ -0.57
ATXN3-201ENST00000340660 PABPC1P11940 636 aaKnown RBP11.48□□□□□ -0.57
ATXN3-201ENST00000340660 MAP4P27816 1152 aaKnown RBP11.48□□□□□ -0.57
ATXN3-201ENST00000340660 TLE4Q04727 773 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 ERV3-1Q14264 604 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 VWA2Q5GFL6 755 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 EARS2Q5JPH6 523 aaKnown RBP11.48□□□□□ -0.57
ATXN3-201ENST00000340660 PAPD7Q5XG87 772 aaKnown RBP11.48□□□□□ -0.57
ATXN3-201ENST00000340660 BNC2Q6ZN30 1099 aaPredicted RBP11.48□□□□□ -0.57
ATXN3-201ENST00000340660 HS2ST1Q7LGA3 356 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 APLFQ8IW19 511 aaPredicted RBP11.48□□□□□ -0.57
ATXN3-201ENST00000340660 STK40Q8N2I9 435 aa11.48□□□□□ -0.57
ATXN3-201ENST00000340660 CISD2Q8N5K1 135 aaKnown RBP11.48□□□□□ -0.57
ATXN3-201ENST00000340660 ARL10Q8N8L6 244 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms