RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 PMLP29590 882 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 PCK1P35558 622 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 C21orf59P57076 290 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 TPI1P60174 286 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 ZNF252P-AS1Q0IIN9 211 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 SUZ12Q15022 739 aaKnown RBP13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 INO80DQ53TQ3 878 aaPredicted RBP13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 CARD16Q5EG05 197 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 ERMARDQ5T6L9 678 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 DPY19L3Q6ZPD9 716 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 UMODL1-AS1Q8N2C9 162 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 DEFB124Q8NES8 71 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 HEPHQ9BQS7 1158 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 NDFIP2Q9NV92 336 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 ANGPTL2Q9UKU9 493 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 AP4E1Q9UPM8 1137 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 YKT6O15498 198 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 FLRT2O43155 660 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 MAGEC1O60732 1142 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 TRIM16O95361 564 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 GYPCP04921 128 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 ITGB7P26010 798 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 CD38P28907 300 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 ACVRL1P37023 503 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 CTSKP43235 329 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 CCT8P50990 548 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 CCNHP51946 323 aaPredicted RBP13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 SNRPD1P62314 119 aaKnown RBP13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 BNC1Q01954 994 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 OVGP1Q12889 678 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 KIF19Q2TAC6 998 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 SETMARQ53H47 684 aaPredicted RBP13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 PIP5KL1Q5T9C9 394 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 NAPEPLDQ6IQ20 393 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 ERN2Q76MJ5 926 aaKnown RBP13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 IQCHQ86VS3 1027 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 NAXDQ8IW45 347 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 PYROXD2Q8N2H3 581 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 SERAC1Q96JX3 654 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 OSBPL1AQ9BXW6 950 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 TNKS2Q9H2K2 1166 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 TSPY26PQ9H489 355 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 GRPEL1Q9HAV7 217 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 AASDHPPTQ9NRN7 309 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 TM7SF3Q9NS93 570 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 PCDHGA4Q9Y5G9 962 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 WASF2Q9Y6W5 498 aa13.58□□□□□ -0.24
SIRPB3P-201ENST00000340424 EEF2KO00418 725 aaKnown RBP13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 GIPC1O14908 333 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 PCDHGA12O60330 932 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 LEFTY1O75610 366 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 CD160O95971 181 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 TPM1P09493 284 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 HOXB3P14651 431 aaPredicted RBP13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 HNRNPH3P31942 346 aaKnown RBP13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 HCAR3P49019 387 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 DNA2P51530 1060 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 NEK3P51956 506 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 NDST2P52849 883 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 METAP1P53582 386 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 PPP2CBP62714 309 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 PPP2CAP67775 309 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 SERINC3Q13530 473 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 PIGHQ14442 188 aaPredicted RBP13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 ZNF423Q2M1K9 1284 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 INAVAQ3KP66 663 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 ARSIQ5FYB1 569 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 SPECC1LQ69YQ0 1117 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 DBX2Q6ZNG2 339 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 ZNF354CQ86Y25 554 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 OXR1Q8N573 874 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 MFSD2AQ8NA29 543 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 CHST14Q8NCH0 376 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 OR2AP1Q8NGE2 309 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 OR2I1PQ8NGU4 316 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 GRIN3AQ8TCU5 1115 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 CPLX3Q8WVH0 158 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 RAB7BQ96AH8 199 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 SLC6A18Q96N87 628 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 XPO4Q9C0E2 1151 aaKnown RBP13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 LCMT1Q9UIC8 334 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 FNDC3AQ9Y2H6 1198 aaKnown RBP13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 FCF1Q9Y324 198 aaKnown RBP13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 PCDHB9Q9Y5E1 797 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 SNX11Q9Y5W9 270 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 SLCO1B1Q9Y6L6 691 aa13.57□□□□□ -0.24
SIRPB3P-201ENST00000340424 RASA4BC9J798 803 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 PRAMEF26H0Y7S4 382 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 RASA4O43374 803 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 BUB1O43683 1085 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 AP1G1O43747 822 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 LRCH4O75427 683 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 POP4O95707 220 aaKnown RBP13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 MIPP30301 263 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 CASP14P31944 242 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 TAS2R38P59533 333 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 RAD51Q06609 339 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 POM121L1PQ3SYA9 428 aa13.56□□□□□ -0.24
SIRPB3P-201ENST00000340424 BOLA3Q53S33 107 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms