RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 HTR4Q13639 388 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 GRM2Q14416 872 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 CCDC85BQ15834 202 aaPredicted RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 FNBP1LQ5T0N5 605 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 LINGO4Q6UY18 593 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 MTSS1LQ765P7 747 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 PRPF39Q86UA1 669 aaKnown RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 ADIPOR2Q86V24 386 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 NAT16Q8N8M0 369 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 TSEN2Q8NCE0 465 aaKnown RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 SPATA22Q8NHS9 363 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 FRMD8Q9BZ67 464 aaPredicted RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 SEPT3Q9UH03 358 aa7.96□□□□□ -1.14
TMC1-202ENST00000340019 AAR2Q9Y312 384 aaKnown RBP7.96□□□□□ -1.14
TMC1-202ENST00000340019 TRIM24O15164 1050 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 MT-CYBP00156 380 aaPredicted RBP7.95□□□□□ -1.14
TMC1-202ENST00000340019 MT-CO1P00395 513 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 GRIA1P42261 906 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 NIPAL4Q0D2K0 466 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 PRPSAP1Q14558 356 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 DMC1Q14565 340 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 SLMAPQ14BN4 828 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 HIF1AQ16665 826 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 MSS51Q4VC12 460 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 TMEM215Q68D42 235 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 CHFRQ96EP1 664 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 PPP1R2P1Q96PQ5 205 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 RBM15Q96T37 977 aaKnown RBP eCLIP7.95□□□□□ -1.14
TMC1-202ENST00000340019 FUT8Q9BYC5 575 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 POLR1EQ9GZS1 481 aaKnown RBP7.95□□□□□ -1.14
TMC1-202ENST00000340019 EPB41L4BQ9H329 900 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 SLC27A6Q9Y2P4 619 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 TTLL3Q9Y4R7 772 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 NUMBLQ9Y6R0 609 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 ANKRD36A6QL64 1941 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 COL4A2P08572 1712 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 TULP3O75386 442 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 GJB3O75712 270 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 ANXA9O76027 345 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 TMCC1O94876 653 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 FOSL2P15408 326 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 ADRA1AP35348 466 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 SERPINH1P50454 418 aaKnown RBP7.95□□□□□ -1.14
TMC1-202ENST00000340019 DSC2Q02487 901 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 SLC20A2Q08357 652 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 RUNX3Q13761 415 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 ZNF235Q14590 738 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 CASP8Q14790 479 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 UAP1Q16222 522 aaPredicted RBP7.95□□□□□ -1.14
TMC1-202ENST00000340019 GEN1Q17RS7 908 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 SPDYCQ5MJ68 293 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 RETSATQ6NUM9 610 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 LRRC8BQ6P9F7 803 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 PPP1R21Q6ZMI0 780 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 AHI1Q8N157 1196 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 AGGF1Q8N302 714 aaeCLIP7.95□□□□□ -1.14
TMC1-202ENST00000340019 TTC17Q96AE7 1141 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 XPO6Q96QU8 1125 aaKnown RBP7.95□□□□□ -1.14
TMC1-202ENST00000340019 WDR83Q9BRX9 315 aaKnown RBP7.95□□□□□ -1.14
TMC1-202ENST00000340019 CINPQ9BW66 212 aaPredicted RBP7.95□□□□□ -1.14
TMC1-202ENST00000340019 HS3ST2Q9Y278 367 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 TICRRQ7Z2Z1 1910 aa7.95□□□□□ -1.14
TMC1-202ENST00000340019 MAP2K7O14733 419 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 ALOX15BO15296 676 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 EIF3HO15372 352 aaKnown RBP eCLIP7.94□□□□□ -1.14
TMC1-202ENST00000340019 AVILO75366 819 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 ZNF821O75541 412 aaPredicted RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 NEBLO76041 1014 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 MLNP12872 115 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 CTSOP43234 321 aaPredicted RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 RGRP47804 291 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 PMS2P54278 862 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 ARL4CP56559 192 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 GEMIN4P57678 1058 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 SKOR1P84550 965 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 NSUN2Q08J23 767 aaKnown RBP eCLIP7.94□□□□□ -1.14
TMC1-202ENST00000340019 MPP3Q13368 585 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 OLIG2Q13516 323 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 FASTKD3Q14CZ7 662 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 KDELC1Q6UW63 502 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 CEP128Q6ZU80 1094 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 CENPUQ71F23 418 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 CCDC25Q86WR0 208 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 YAF2Q8IY57 180 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 PDIK1LQ8N165 341 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 BBS5Q8N3I7 341 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 PHTF2Q8N3S3 785 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 CPA6Q8N4T0 437 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 DEFB123Q8N688 67 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 MRGPRX2Q96LB1 330 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 NSMCE3Q96MG7 304 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 TRMT61BQ9BVS5 477 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 CDC42EP4Q9H3Q1 356 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 SEMA4AQ9H3S1 761 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 LRRC40Q9H9A6 602 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 XAB2Q9HCS7 855 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 VPS45Q9NRW7 570 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 DNAJC17Q9NVM6 304 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 GTSE1Q9NYZ3 720 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 UBP1Q9NZI7 540 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms