RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 SOX17Q9H6I2 414 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-202ENST00000339570 TNFRSF12AQ9NP84 129 aa16.36■□□□□ 0.21
SCARB1-202ENST00000339570 I6L893 689 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-202ENST00000339570 SOCS7O14512 581 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 ADARP55265 1226 aaKnown RBP16.35■□□□□ 0.21
SCARB1-202ENST00000339570 CDH13P55290 713 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 KCTD21Q4G0X4 260 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 PKDCCQ504Y2 493 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 LIPMQ5VYY2 423 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 ANKRD52Q8NB46 1076 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 SIKE1Q9BRV8 207 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 ULBP1Q9BZM6 244 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 FAM96AQ9H5X1 160 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 STN1Q9H668 368 aaKnown RBP16.35■□□□□ 0.21
SCARB1-202ENST00000339570 PIN4Q9Y237 131 aaKnown RBP16.35■□□□□ 0.21
SCARB1-202ENST00000339570 YJEFN3A6XGL0 299 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 TMCC1O94876 653 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 CD68P34810 354 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-202ENST00000339570 MYBPC3Q14896 1274 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 HABP4Q5JVS0 413 aaKnown RBP16.35■□□□□ 0.21
SCARB1-202ENST00000339570 FAM47BQ8NA70 645 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 BTBD9Q96Q07 612 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 TMEM165Q9HC07 324 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 AP4S1Q9Y587 144 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 PHIPQ8WWQ0 1821 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-202ENST00000339570 MOCS2O96007 188 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-202ENST00000339570 CYP2C8P10632 490 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 MYL4P12829 197 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 CES1P23141 567 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 GRIA3P42263 894 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 PTPN9P43378 593 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 MGAT5BQ3V5L5 792 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 FBXO47Q5MNV8 452 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 CNSTQ6PJW8 725 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 RIOX2Q8IUF8 465 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 APPL2Q8NEU8 664 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 BEST2Q8NFU1 509 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 RP9Q8TA86 221 aaKnown RBP16.35■□□□□ 0.21
SCARB1-202ENST00000339570 NCSTNQ92542 709 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 LRCH3Q96II8 777 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-202ENST00000339570 DNAAF2Q9NVR5 837 aaKnown RBP16.35■□□□□ 0.21
SCARB1-202ENST00000339570 CSADQ9Y600 493 aa16.35■□□□□ 0.21
SCARB1-202ENST00000339570 TRMUO75648 421 aaKnown RBP16.34■□□□□ 0.21
SCARB1-202ENST00000339570 CDK4P11802 303 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 GABRB3P28472 473 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 TTLL4Q14679 1199 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 ZNF470Q6ECI4 717 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 HERC6Q8IVU3 1022 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 MARVELD2Q8N4S9 558 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 NAT16Q8N8M0 369 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 ACOT9Q9Y305 439 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 GNAO1P09471 354 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 SBK3P0C264 359 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 KCNA5P22460 613 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 HPCAP84074 193 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 ITKQ08881 620 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 CAPRIN1Q14444 709 aaKnown RBP16.34■□□□□ 0.21
SCARB1-202ENST00000339570 INSCQ1MX18 579 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 KIF19Q2TAC6 998 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 SLC25A52Q3SY17 297 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 PLPPR4Q7Z2D5 763 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 CLVS1Q8IUQ0 354 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-202ENST00000339570 OFCC1Q8IZS5 231 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 PTTG2Q9NZH5 202 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 DSEQ9UL01 958 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 KIAA1257Q9ULG3 409 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 USP3Q9Y6I4 520 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 HUS1O60921 280 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 DDHD2O94830 711 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 MLNP12872 115 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 PLIN5Q00G26 463 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 CACNB2Q08289 660 aaPredicted RBP16.34■□□□□ 0.21
SCARB1-202ENST00000339570 C16orf72Q14CZ0 275 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 ANO4Q32M45 955 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 ZNF789Q5FWF6 425 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 LSMEM2Q8N112 164 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 TXNDC5Q8NBS9 432 aaKnown RBP16.34■□□□□ 0.21
SCARB1-202ENST00000339570 CYGBQ8WWM9 190 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 ZFP42Q96MM3 310 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 FICDQ9BVA6 458 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 TSR3Q9UJK0 312 aaKnown RBP16.34■□□□□ 0.21
SCARB1-202ENST00000339570 FNDC3AQ9Y2H6 1198 aaKnown RBP16.34■□□□□ 0.21
SCARB1-202ENST00000339570 RNF11Q9Y3C5 154 aa16.34■□□□□ 0.21
SCARB1-202ENST00000339570 FAM95CA0A1B0GW59 222 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 TCAF2A6NFQ2 919 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 CASQ2O14958 399 aaPredicted RBP16.33■□□□□ 0.2
SCARB1-202ENST00000339570 GAS2O43903 313 aaKnown RBP16.33■□□□□ 0.2
SCARB1-202ENST00000339570 AP2A1O95782 977 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 PGK1P00558 417 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 SLC35E2BP0CK96 405 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 CHRM3P20309 590 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 YAP1P46937 504 aaKnown RBP16.33■□□□□ 0.2
SCARB1-202ENST00000339570 PSMD7P51665 324 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 SNX16P57768 344 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 PRKAA1Q13131 559 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 RBM20Q5T481 1227 aaKnown RBP16.33■□□□□ 0.2
SCARB1-202ENST00000339570 C9orf57Q5W0N0 161 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 WSCD1Q658N2 575 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms